Gene : Solyc01g094150.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K13254 - spastin (SPAST) Description:  26S protease regulatory subunit 6A (AHRD V1 *--- PRS6A_RAT); contains Interpro domain(s) IPR003959 ATPase, AAA-type, core
Genomic Order:  2570 Name:  ? Solyc01g094150.2
Secondary Identifier:  ? PAC:36138721
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g094150.2 0.5kb upstream 0.5kb upstream 10650 true SL2.50ch01: 85697046-85707695 Solanum lycopersicum
Solyc01g094150.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 85697046-85697545 Solanum lycopersicum
Solyc01g094150.2 0.5kb downstream 0.5kb downstream 10650 true SL2.50ch01: 85697546-85708195 Solanum lycopersicum
Solyc01g094150.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 85707696-85708195 Solanum lycopersicum
Solyc01g094150.2 1.0kb upstream 1.0kb upstream 11150 true SL2.50ch01: 85696546-85707695 Solanum lycopersicum
Solyc01g094150.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 85696546-85697545 Solanum lycopersicum
Solyc01g094150.2 1.0kb downstream 1.0kb downstream 11150 true SL2.50ch01: 85697546-85708695 Solanum lycopersicum
Solyc01g094150.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 85707696-85708695 Solanum lycopersicum
Solyc01g094150.2 2.0kb upstream 2.0kb upstream 12150 true SL2.50ch01: 85695546-85707695 Solanum lycopersicum
Solyc01g094150.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 85695546-85697545 Solanum lycopersicum
Solyc01g094150.2 2.0kb downstream 2.0kb downstream 12150 true SL2.50ch01: 85697546-85709695 Solanum lycopersicum
Solyc01g094150.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 85707696-85709695 Solanum lycopersicum
Solyc01g094150.2 5.0kb upstream 5.0kb upstream 15150 true SL2.50ch01: 85692546-85707695 Solanum lycopersicum
Solyc01g094150.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 85692546-85697545 Solanum lycopersicum
Solyc01g094150.2 5.0kb downstream 5.0kb downstream 15150 true SL2.50ch01: 85697546-85712695 Solanum lycopersicum
Solyc01g094150.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 85707696-85712695 Solanum lycopersicum
Solyc01g094150.2 10.0kb upstream 10.0kb upstream 20150 true SL2.50ch01: 85687546-85707695 Solanum lycopersicum
Solyc01g094150.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 85687546-85697545 Solanum lycopersicum
Solyc01g094150.2 10.0kb downstream 10.0kb downstream 20150 true SL2.50ch01: 85697546-85717695 Solanum lycopersicum
Solyc01g094150.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 85707696-85717695 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472519 5263 Asterids View MSA
123736430 5271 Pentapetalae View MSA
122793847 5272 Eudicot View MSA
122042209 5273 Angiosperm View MSA
123428918 5275 Viridiplantae View MSA
121344282 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain