Gene : Solyc02g071240.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K13217 - pre-mRNA-processing factor 39 (PRPF39, PRP39) Description:  Genomic DNA chromosome 5 P1 clone MPL12 (AHRD V1 *-*- Q9FL22_ARATH)
Genomic Order:  1404 Name:  ? Solyc02g071240.2
Secondary Identifier:  ? PAC:36157182
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g071240.2 0.5kb upstream 0.5kb upstream 6036 true SL2.50ch02: 40715753-40721788 Solanum lycopersicum
Solyc02g071240.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 40715753-40716252 Solanum lycopersicum
Solyc02g071240.2 0.5kb downstream 0.5kb downstream 6036 true SL2.50ch02: 40716253-40722288 Solanum lycopersicum
Solyc02g071240.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 40721789-40722288 Solanum lycopersicum
Solyc02g071240.2 1.0kb upstream 1.0kb upstream 6536 true SL2.50ch02: 40715253-40721788 Solanum lycopersicum
Solyc02g071240.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 40715253-40716252 Solanum lycopersicum
Solyc02g071240.2 1.0kb downstream 1.0kb downstream 6536 true SL2.50ch02: 40716253-40722788 Solanum lycopersicum
Solyc02g071240.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 40721789-40722788 Solanum lycopersicum
Solyc02g071240.2 2.0kb upstream 2.0kb upstream 7536 true SL2.50ch02: 40714253-40721788 Solanum lycopersicum
Solyc02g071240.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 40714253-40716252 Solanum lycopersicum
Solyc02g071240.2 2.0kb downstream 2.0kb downstream 7536 true SL2.50ch02: 40716253-40723788 Solanum lycopersicum
Solyc02g071240.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 40721789-40723788 Solanum lycopersicum
Solyc02g071240.2 5.0kb upstream 5.0kb upstream 10536 true SL2.50ch02: 40711253-40721788 Solanum lycopersicum
Solyc02g071240.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 40711253-40716252 Solanum lycopersicum
Solyc02g071240.2 5.0kb downstream 5.0kb downstream 10536 true SL2.50ch02: 40716253-40726788 Solanum lycopersicum
Solyc02g071240.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 40721789-40726788 Solanum lycopersicum
Solyc02g071240.2 10.0kb upstream 10.0kb upstream 15536 true SL2.50ch02: 40706253-40721788 Solanum lycopersicum
Solyc02g071240.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 40706253-40716252 Solanum lycopersicum
Solyc02g071240.2 10.0kb downstream 10.0kb downstream 15536 true SL2.50ch02: 40716253-40731788 Solanum lycopersicum
Solyc02g071240.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 40721789-40731788 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121365452 5263 Asterids Singleton cluster - no MSA
123753236 5271 Pentapetalae View MSA
122790404 5272 Eudicot View MSA
122048891 5273 Angiosperm View MSA
121349849 5274 Embryophyte View MSA
123426942 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain