Gene : Solyc02g062920.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED Description:  Splicing factor U2AF large subunit (AHRD V1 ***- D8U7V9_VOLCA); contains Interpro domain(s) IPR006529 U2 snRNP auxilliary factor, large subunit, splicing factor
Genomic Order:  773 Name:  ? Solyc02g062920.2
Secondary Identifier:  ? PAC:36159502
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g062920.2 0.5kb upstream 0.5kb upstream 9902 true SL2.50ch02: 34859860-34869761 Solanum lycopersicum
Solyc02g062920.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 34859860-34860359 Solanum lycopersicum
Solyc02g062920.2 0.5kb downstream 0.5kb downstream 9902 true SL2.50ch02: 34860360-34870261 Solanum lycopersicum
Solyc02g062920.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 34869762-34870261 Solanum lycopersicum
Solyc02g062920.2 1.0kb upstream 1.0kb upstream 10402 true SL2.50ch02: 34859360-34869761 Solanum lycopersicum
Solyc02g062920.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 34859360-34860359 Solanum lycopersicum
Solyc02g062920.2 1.0kb downstream 1.0kb downstream 10402 true SL2.50ch02: 34860360-34870761 Solanum lycopersicum
Solyc02g062920.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 34869762-34870761 Solanum lycopersicum
Solyc02g062920.2 2.0kb upstream 2.0kb upstream 11402 true SL2.50ch02: 34858360-34869761 Solanum lycopersicum
Solyc02g062920.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 34858360-34860359 Solanum lycopersicum
Solyc02g062920.2 2.0kb downstream 2.0kb downstream 11402 true SL2.50ch02: 34860360-34871761 Solanum lycopersicum
Solyc02g062920.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 34869762-34871761 Solanum lycopersicum
Solyc02g062920.2 5.0kb upstream 5.0kb upstream 14402 true SL2.50ch02: 34855360-34869761 Solanum lycopersicum
Solyc02g062920.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 34855360-34860359 Solanum lycopersicum
Solyc02g062920.2 5.0kb downstream 5.0kb downstream 14402 true SL2.50ch02: 34860360-34874761 Solanum lycopersicum
Solyc02g062920.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 34869762-34874761 Solanum lycopersicum
Solyc02g062920.2 10.0kb upstream 10.0kb upstream 19402 true SL2.50ch02: 34850360-34869761 Solanum lycopersicum
Solyc02g062920.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 34850360-34860359 Solanum lycopersicum
Solyc02g062920.2 10.0kb downstream 10.0kb downstream 19402 true SL2.50ch02: 34860360-34879761 Solanum lycopersicum
Solyc02g062920.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 34869762-34879761 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478465 5263 Asterids View MSA
123749949 5271 Pentapetalae View MSA
122795253 5272 Eudicot View MSA
122050030 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349493 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain