Gene : Solyc01g091650.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) Description:  COP9 signalosome complex subunit 1 (AHRD V1 ***- B6THB6_MAIZE); contains Interpro domain(s) IPR019585 26S proteasome, regulatory subunit Rpn7
Genomic Order:  2519 Name:  ? Solyc01g091650.2
Secondary Identifier:  ? PAC:36140878
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g091650.2 0.5kb upstream 0.5kb upstream 5510 true SL2.50ch01: 85244190-85249699 Solanum lycopersicum
Solyc01g091650.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 85249200-85249699 Solanum lycopersicum
Solyc01g091650.2 0.5kb downstream 0.5kb downstream 5510 true SL2.50ch01: 85243690-85249199 Solanum lycopersicum
Solyc01g091650.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 85243690-85244189 Solanum lycopersicum
Solyc01g091650.2 1.0kb upstream 1.0kb upstream 6010 true SL2.50ch01: 85244190-85250199 Solanum lycopersicum
Solyc01g091650.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 85249200-85250199 Solanum lycopersicum
Solyc01g091650.2 1.0kb downstream 1.0kb downstream 6010 true SL2.50ch01: 85243190-85249199 Solanum lycopersicum
Solyc01g091650.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 85243190-85244189 Solanum lycopersicum
Solyc01g091650.2 2.0kb upstream 2.0kb upstream 7010 true SL2.50ch01: 85244190-85251199 Solanum lycopersicum
Solyc01g091650.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 85249200-85251199 Solanum lycopersicum
Solyc01g091650.2 2.0kb downstream 2.0kb downstream 7010 true SL2.50ch01: 85242190-85249199 Solanum lycopersicum
Solyc01g091650.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 85242190-85244189 Solanum lycopersicum
Solyc01g091650.2 5.0kb upstream 5.0kb upstream 10010 true SL2.50ch01: 85244190-85254199 Solanum lycopersicum
Solyc01g091650.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 85249200-85254199 Solanum lycopersicum
Solyc01g091650.2 5.0kb downstream 5.0kb downstream 10010 true SL2.50ch01: 85239190-85249199 Solanum lycopersicum
Solyc01g091650.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 85239190-85244189 Solanum lycopersicum
Solyc01g091650.2 10.0kb upstream 10.0kb upstream 15010 true SL2.50ch01: 85244190-85259199 Solanum lycopersicum
Solyc01g091650.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 85249200-85259199 Solanum lycopersicum
Solyc01g091650.2 10.0kb downstream 10.0kb downstream 15010 true SL2.50ch01: 85234190-85249199 Solanum lycopersicum
Solyc01g091650.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 85234190-85244189 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474252 5263 Asterids View MSA
123740454 5271 Pentapetalae View MSA
122790295 5272 Eudicot View MSA
122047675 5273 Angiosperm View MSA
121344985 5274 Embryophyte View MSA
123424538 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain