Gene : Solyc02g062520.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) 5.4.99.23 - 23S rRNA pseudouridine(1911/1915/1917) synthase Description:  Pseudouridine synthase family protein (AHRD V1 ***- D7LU41_ARALY); contains Interpro domain(s) IPR006225 Pseudouridine synthase, RluC/RluD
Genomic Order:  733 Name:  ? Solyc02g062520.2
Secondary Identifier:  ? PAC:36159431
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g062520.2 0.5kb upstream 0.5kb upstream 11882 true SL2.50ch02: 34205142-34217023 Solanum lycopersicum
Solyc02g062520.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 34216524-34217023 Solanum lycopersicum
Solyc02g062520.2 0.5kb downstream 0.5kb downstream 11882 true SL2.50ch02: 34204642-34216523 Solanum lycopersicum
Solyc02g062520.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 34204642-34205141 Solanum lycopersicum
Solyc02g062520.2 1.0kb upstream 1.0kb upstream 12382 true SL2.50ch02: 34205142-34217523 Solanum lycopersicum
Solyc02g062520.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 34216524-34217523 Solanum lycopersicum
Solyc02g062520.2 1.0kb downstream 1.0kb downstream 12382 true SL2.50ch02: 34204142-34216523 Solanum lycopersicum
Solyc02g062520.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 34204142-34205141 Solanum lycopersicum
Solyc02g062520.2 2.0kb upstream 2.0kb upstream 13382 true SL2.50ch02: 34205142-34218523 Solanum lycopersicum
Solyc02g062520.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 34216524-34218523 Solanum lycopersicum
Solyc02g062520.2 2.0kb downstream 2.0kb downstream 13382 true SL2.50ch02: 34203142-34216523 Solanum lycopersicum
Solyc02g062520.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 34203142-34205141 Solanum lycopersicum
Solyc02g062520.2 5.0kb upstream 5.0kb upstream 16382 true SL2.50ch02: 34205142-34221523 Solanum lycopersicum
Solyc02g062520.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 34216524-34221523 Solanum lycopersicum
Solyc02g062520.2 5.0kb downstream 5.0kb downstream 16382 true SL2.50ch02: 34200142-34216523 Solanum lycopersicum
Solyc02g062520.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 34200142-34205141 Solanum lycopersicum
Solyc02g062520.2 10.0kb upstream 10.0kb upstream 21382 true SL2.50ch02: 34205142-34226523 Solanum lycopersicum
Solyc02g062520.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 34216524-34226523 Solanum lycopersicum
Solyc02g062520.2 10.0kb downstream 10.0kb downstream 21382 true SL2.50ch02: 34195142-34216523 Solanum lycopersicum
Solyc02g062520.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 34195142-34205141 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467922 5263 Asterids View MSA
123737257 5271 Pentapetalae View MSA
122788829 5272 Eudicot View MSA
122047050 5273 Angiosperm View MSA
121344286 5274 Embryophyte View MSA
123426669 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain