Gene : Solyc02g092920.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR24093:SF272 - CADMIUM/ZINC-TRANSPORTING ATPASE HMA1, CHLOROPLASTIC-RELATED Description:  Cadmium-transporting ATPase (AHRD V1 ***- Q5WLE3_BACSK); contains Interpro domain(s) IPR006404 ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating
Genomic Order:  3164 Name:  ? Solyc02g092920.2
Secondary Identifier:  ? PAC:36157800
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g092920.2 0.5kb upstream 0.5kb upstream 9107 true SL2.50ch02: 53867012-53876118 Solanum lycopersicum
Solyc02g092920.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 53867012-53867511 Solanum lycopersicum
Solyc02g092920.2 0.5kb downstream 0.5kb downstream 9107 true SL2.50ch02: 53867512-53876618 Solanum lycopersicum
Solyc02g092920.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 53876119-53876618 Solanum lycopersicum
Solyc02g092920.2 1.0kb upstream 1.0kb upstream 9607 true SL2.50ch02: 53866512-53876118 Solanum lycopersicum
Solyc02g092920.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 53866512-53867511 Solanum lycopersicum
Solyc02g092920.2 1.0kb downstream 1.0kb downstream 9607 true SL2.50ch02: 53867512-53877118 Solanum lycopersicum
Solyc02g092920.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 53876119-53877118 Solanum lycopersicum
Solyc02g092920.2 2.0kb upstream 2.0kb upstream 10607 true SL2.50ch02: 53865512-53876118 Solanum lycopersicum
Solyc02g092920.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 53865512-53867511 Solanum lycopersicum
Solyc02g092920.2 2.0kb downstream 2.0kb downstream 10607 true SL2.50ch02: 53867512-53878118 Solanum lycopersicum
Solyc02g092920.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 53876119-53878118 Solanum lycopersicum
Solyc02g092920.2 5.0kb upstream 5.0kb upstream 13607 true SL2.50ch02: 53862512-53876118 Solanum lycopersicum
Solyc02g092920.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 53862512-53867511 Solanum lycopersicum
Solyc02g092920.2 5.0kb downstream 5.0kb downstream 13607 true SL2.50ch02: 53867512-53881118 Solanum lycopersicum
Solyc02g092920.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 53876119-53881118 Solanum lycopersicum
Solyc02g092920.2 10.0kb upstream 10.0kb upstream 18607 true SL2.50ch02: 53857512-53876118 Solanum lycopersicum
Solyc02g092920.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 53857512-53867511 Solanum lycopersicum
Solyc02g092920.2 10.0kb downstream 10.0kb downstream 18607 true SL2.50ch02: 53867512-53886118 Solanum lycopersicum
Solyc02g092920.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 53876119-53886118 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471906 5263 Asterids View MSA
123739287 5271 Pentapetalae View MSA
122793193 5272 Eudicot View MSA
122049253 5273 Angiosperm View MSA
121346683 5274 Embryophyte View MSA
123427971 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain