Gene : Solyc02g093230.2 S. lycopersicum ITAG2.4
Defline:  (1 of 4) PTHR10509//PTHR10509:SF19 - O-METHYLTRANSFERASE-RELATED // SUBFAMILY NOT NAMED Description:  Caffeoyl-CoA O-methyltransferase (AHRD V1 **** A8IFQ7_SOLLC); contains Interpro domain(s) IPR002935 O-methyltransferase, family 3
Genomic Order:  3195 Name:  ? Solyc02g093230.2
Secondary Identifier:  ? PAC:36157929
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-1121 Solanum lycopersicum pathologic  
Slycopersicum PWY-361 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g093230.2 0.5kb upstream 0.5kb upstream 1885 true SL2.50ch02: 54162173-54164057 Solanum lycopersicum
Solyc02g093230.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 54163558-54164057 Solanum lycopersicum
Solyc02g093230.2 0.5kb downstream 0.5kb downstream 1885 true SL2.50ch02: 54161673-54163557 Solanum lycopersicum
Solyc02g093230.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 54161673-54162172 Solanum lycopersicum
Solyc02g093230.2 1.0kb upstream 1.0kb upstream 2385 true SL2.50ch02: 54162173-54164557 Solanum lycopersicum
Solyc02g093230.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 54163558-54164557 Solanum lycopersicum
Solyc02g093230.2 1.0kb downstream 1.0kb downstream 2385 true SL2.50ch02: 54161173-54163557 Solanum lycopersicum
Solyc02g093230.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 54161173-54162172 Solanum lycopersicum
Solyc02g093230.2 2.0kb upstream 2.0kb upstream 3385 true SL2.50ch02: 54162173-54165557 Solanum lycopersicum
Solyc02g093230.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 54163558-54165557 Solanum lycopersicum
Solyc02g093230.2 2.0kb downstream 2.0kb downstream 3385 true SL2.50ch02: 54160173-54163557 Solanum lycopersicum
Solyc02g093230.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 54160173-54162172 Solanum lycopersicum
Solyc02g093230.2 5.0kb upstream 5.0kb upstream 6385 true SL2.50ch02: 54162173-54168557 Solanum lycopersicum
Solyc02g093230.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 54163558-54168557 Solanum lycopersicum
Solyc02g093230.2 5.0kb downstream 5.0kb downstream 6385 true SL2.50ch02: 54157173-54163557 Solanum lycopersicum
Solyc02g093230.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 54157173-54162172 Solanum lycopersicum
Solyc02g093230.2 10.0kb upstream 10.0kb upstream 11385 true SL2.50ch02: 54162173-54173557 Solanum lycopersicum
Solyc02g093230.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 54163558-54173557 Solanum lycopersicum
Solyc02g093230.2 10.0kb downstream 10.0kb downstream 11385 true SL2.50ch02: 54152173-54163557 Solanum lycopersicum
Solyc02g093230.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 54152173-54162172 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121482998 5263 Asterids View MSA
123746911 5271 Pentapetalae View MSA
122790683 5272 Eudicot View MSA
122043643 5273 Angiosperm View MSA
121346702 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain