Gene : Solyc02g093250.2 S. lycopersicum ITAG2.4
Defline:  (1 of 4) PTHR10509//PTHR10509:SF19 - O-METHYLTRANSFERASE-RELATED // SUBFAMILY NOT NAMED Description:  Caffeoyl-CoA O-methyltransferase (AHRD V1 **** A8IFQ7_SOLLC); contains Interpro domain(s) IPR002935 O-methyltransferase, family 3
Genomic Order:  3197 Name:  ? Solyc02g093250.2
Secondary Identifier:  ? PAC:36156651
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-1121 Solanum lycopersicum pathologic  
Slycopersicum PWY-361 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g093250.2 0.5kb upstream 0.5kb upstream 1857 true SL2.50ch02: 54172792-54174648 Solanum lycopersicum
Solyc02g093250.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 54174149-54174648 Solanum lycopersicum
Solyc02g093250.2 0.5kb downstream 0.5kb downstream 1857 true SL2.50ch02: 54172292-54174148 Solanum lycopersicum
Solyc02g093250.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 54172292-54172791 Solanum lycopersicum
Solyc02g093250.2 1.0kb upstream 1.0kb upstream 2357 true SL2.50ch02: 54172792-54175148 Solanum lycopersicum
Solyc02g093250.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 54174149-54175148 Solanum lycopersicum
Solyc02g093250.2 1.0kb downstream 1.0kb downstream 2357 true SL2.50ch02: 54171792-54174148 Solanum lycopersicum
Solyc02g093250.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 54171792-54172791 Solanum lycopersicum
Solyc02g093250.2 2.0kb upstream 2.0kb upstream 3357 true SL2.50ch02: 54172792-54176148 Solanum lycopersicum
Solyc02g093250.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 54174149-54176148 Solanum lycopersicum
Solyc02g093250.2 2.0kb downstream 2.0kb downstream 3357 true SL2.50ch02: 54170792-54174148 Solanum lycopersicum
Solyc02g093250.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 54170792-54172791 Solanum lycopersicum
Solyc02g093250.2 5.0kb upstream 5.0kb upstream 6357 true SL2.50ch02: 54172792-54179148 Solanum lycopersicum
Solyc02g093250.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 54174149-54179148 Solanum lycopersicum
Solyc02g093250.2 5.0kb downstream 5.0kb downstream 6357 true SL2.50ch02: 54167792-54174148 Solanum lycopersicum
Solyc02g093250.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 54167792-54172791 Solanum lycopersicum
Solyc02g093250.2 10.0kb upstream 10.0kb upstream 11357 true SL2.50ch02: 54172792-54184148 Solanum lycopersicum
Solyc02g093250.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 54174149-54184148 Solanum lycopersicum
Solyc02g093250.2 10.0kb downstream 10.0kb downstream 11357 true SL2.50ch02: 54162792-54174148 Solanum lycopersicum
Solyc02g093250.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 54162792-54172791 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477636 5263 Asterids View MSA
123746911 5271 Pentapetalae View MSA
122790683 5272 Eudicot View MSA
122043643 5273 Angiosperm View MSA
121346702 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain