Gene : Solyc02g091560.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11680:SF10 - SERINE HYDROXYMETHYLTRANSFERASE 1, MITOCHONDRIAL Description:  Serine hydroxymethyltransferase (AHRD V1 **** C6ZJZ0_SOYBN); contains Interpro domain(s) IPR001085 Serine hydroxymethyltransferase
Genomic Order:  3028 Name:  ? Solyc02g091560.2
Secondary Identifier:  ? PAC:36156878
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum GLYSYN-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-2161 Solanum lycopersicum pathologic  
Slycopersicum PWY-3841 Solanum lycopersicum pathologic  
Slycopersicum SER-GLYSYN-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g091560.2 0.5kb upstream 0.5kb upstream 6996 true SL2.50ch02: 52821946-52828941 Solanum lycopersicum
Solyc02g091560.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 52821946-52822445 Solanum lycopersicum
Solyc02g091560.2 0.5kb downstream 0.5kb downstream 6996 true SL2.50ch02: 52822446-52829441 Solanum lycopersicum
Solyc02g091560.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 52828942-52829441 Solanum lycopersicum
Solyc02g091560.2 1.0kb upstream 1.0kb upstream 7496 true SL2.50ch02: 52821446-52828941 Solanum lycopersicum
Solyc02g091560.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 52821446-52822445 Solanum lycopersicum
Solyc02g091560.2 1.0kb downstream 1.0kb downstream 7496 true SL2.50ch02: 52822446-52829941 Solanum lycopersicum
Solyc02g091560.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 52828942-52829941 Solanum lycopersicum
Solyc02g091560.2 2.0kb upstream 2.0kb upstream 8496 true SL2.50ch02: 52820446-52828941 Solanum lycopersicum
Solyc02g091560.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 52820446-52822445 Solanum lycopersicum
Solyc02g091560.2 2.0kb downstream 2.0kb downstream 8496 true SL2.50ch02: 52822446-52830941 Solanum lycopersicum
Solyc02g091560.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 52828942-52830941 Solanum lycopersicum
Solyc02g091560.2 5.0kb upstream 5.0kb upstream 11496 true SL2.50ch02: 52817446-52828941 Solanum lycopersicum
Solyc02g091560.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 52817446-52822445 Solanum lycopersicum
Solyc02g091560.2 5.0kb downstream 5.0kb downstream 11496 true SL2.50ch02: 52822446-52833941 Solanum lycopersicum
Solyc02g091560.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 52828942-52833941 Solanum lycopersicum
Solyc02g091560.2 10.0kb upstream 10.0kb upstream 16496 true SL2.50ch02: 52812446-52828941 Solanum lycopersicum
Solyc02g091560.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 52812446-52822445 Solanum lycopersicum
Solyc02g091560.2 10.0kb downstream 10.0kb downstream 16496 true SL2.50ch02: 52822446-52838941 Solanum lycopersicum
Solyc02g091560.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 52828942-52838941 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467814 5263 Asterids View MSA
123747223 5271 Pentapetalae View MSA
122789073 5272 Eudicot View MSA
122045639 5273 Angiosperm View MSA
121346714 5274 Embryophyte View MSA
123424879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain