Gene : Solyc01g097800.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR30345 - RIBOSE-5-PHOSPHATE ISOMERASE B Description:  Galactose-6-phosphate isomerase subunit lacB (AHRD V1 *-*- LACB_CLOAB); contains Interpro domain(s) IPR012100 DNA-damage-repair/toleration protein, DRT102
Genomic Order:  2934 Name:  ? Solyc01g097800.2
Secondary Identifier:  ? PAC:36140696
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum CALVIN-PWY Solanum lycopersicum pathologic  
Slycopersicum NONOXIPENT-PWY Solanum lycopersicum pathologic  
Slycopersicum PENTOSE-P-PWY Solanum lycopersicum pathologic  
Slycopersicum PHOTOALL-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-5723 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g097800.2 0.5kb upstream 0.5kb upstream 3350 true SL2.50ch01: 88512051-88515400 Solanum lycopersicum
Solyc01g097800.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 88512051-88512550 Solanum lycopersicum
Solyc01g097800.2 0.5kb downstream 0.5kb downstream 3350 true SL2.50ch01: 88512551-88515900 Solanum lycopersicum
Solyc01g097800.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 88515401-88515900 Solanum lycopersicum
Solyc01g097800.2 1.0kb upstream 1.0kb upstream 3850 true SL2.50ch01: 88511551-88515400 Solanum lycopersicum
Solyc01g097800.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 88511551-88512550 Solanum lycopersicum
Solyc01g097800.2 1.0kb downstream 1.0kb downstream 3850 true SL2.50ch01: 88512551-88516400 Solanum lycopersicum
Solyc01g097800.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 88515401-88516400 Solanum lycopersicum
Solyc01g097800.2 2.0kb upstream 2.0kb upstream 4850 true SL2.50ch01: 88510551-88515400 Solanum lycopersicum
Solyc01g097800.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 88510551-88512550 Solanum lycopersicum
Solyc01g097800.2 2.0kb downstream 2.0kb downstream 4850 true SL2.50ch01: 88512551-88517400 Solanum lycopersicum
Solyc01g097800.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 88515401-88517400 Solanum lycopersicum
Solyc01g097800.2 5.0kb upstream 5.0kb upstream 7850 true SL2.50ch01: 88507551-88515400 Solanum lycopersicum
Solyc01g097800.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 88507551-88512550 Solanum lycopersicum
Solyc01g097800.2 5.0kb downstream 5.0kb downstream 7850 true SL2.50ch01: 88512551-88520400 Solanum lycopersicum
Solyc01g097800.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 88515401-88520400 Solanum lycopersicum
Solyc01g097800.2 10.0kb upstream 10.0kb upstream 12850 true SL2.50ch01: 88502551-88515400 Solanum lycopersicum
Solyc01g097800.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 88502551-88512550 Solanum lycopersicum
Solyc01g097800.2 10.0kb downstream 10.0kb downstream 12850 true SL2.50ch01: 88512551-88525400 Solanum lycopersicum
Solyc01g097800.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 88515401-88525400 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466518 5263 Asterids View MSA
123736544 5271 Pentapetalae View MSA
122789174 5272 Eudicot View MSA
122042906 5273 Angiosperm View MSA
121349668 5274 Embryophyte View MSA
123381392 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain