Gene : Solyc02g094090.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR14190 - SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52 Description:  Vacuolar protein sorting 52 (AHRD V1 **-- Q5TJF1_CANFA); contains Interpro domain(s) IPR007258 Vps52/Sac2
Genomic Order:  3280 Name:  ? Solyc02g094090.2
Secondary Identifier:  ? PAC:36156680
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g094090.2 0.5kb upstream 0.5kb upstream 17637 true SL2.50ch02: 54715133-54732769 Solanum lycopersicum
Solyc02g094090.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 54732270-54732769 Solanum lycopersicum
Solyc02g094090.2 0.5kb downstream 0.5kb downstream 17637 true SL2.50ch02: 54714633-54732269 Solanum lycopersicum
Solyc02g094090.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 54714633-54715132 Solanum lycopersicum
Solyc02g094090.2 1.0kb upstream 1.0kb upstream 18137 true SL2.50ch02: 54715133-54733269 Solanum lycopersicum
Solyc02g094090.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 54732270-54733269 Solanum lycopersicum
Solyc02g094090.2 1.0kb downstream 1.0kb downstream 18137 true SL2.50ch02: 54714133-54732269 Solanum lycopersicum
Solyc02g094090.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 54714133-54715132 Solanum lycopersicum
Solyc02g094090.2 2.0kb upstream 2.0kb upstream 19137 true SL2.50ch02: 54715133-54734269 Solanum lycopersicum
Solyc02g094090.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 54732270-54734269 Solanum lycopersicum
Solyc02g094090.2 2.0kb downstream 2.0kb downstream 19137 true SL2.50ch02: 54713133-54732269 Solanum lycopersicum
Solyc02g094090.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 54713133-54715132 Solanum lycopersicum
Solyc02g094090.2 5.0kb upstream 5.0kb upstream 22137 true SL2.50ch02: 54715133-54737269 Solanum lycopersicum
Solyc02g094090.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 54732270-54737269 Solanum lycopersicum
Solyc02g094090.2 5.0kb downstream 5.0kb downstream 22137 true SL2.50ch02: 54710133-54732269 Solanum lycopersicum
Solyc02g094090.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 54710133-54715132 Solanum lycopersicum
Solyc02g094090.2 10.0kb upstream 10.0kb upstream 27137 true SL2.50ch02: 54715133-54742269 Solanum lycopersicum
Solyc02g094090.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 54732270-54742269 Solanum lycopersicum
Solyc02g094090.2 10.0kb downstream 10.0kb downstream 27137 true SL2.50ch02: 54705133-54732269 Solanum lycopersicum
Solyc02g094090.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 54705133-54715132 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469817 5263 Asterids View MSA
123738224 5271 Pentapetalae View MSA
122792330 5272 Eudicot View MSA
122043794 5273 Angiosperm View MSA
121345189 5274 Embryophyte View MSA
123425999 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain