Gene : Solyc02g089260.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K10691 - E3 ubiquitin-protein ligase UBR4 (UBR4, ZUBR1) Description:  E3 ubiquitin-protein ligase UBR4 (AHRD V1 *--- UBR4_HUMAN); contains Interpro domain(s) IPR013993 Zinc finger, N-recognin, metazoa
Genomic Order:  2801 Name:  ? Solyc02g089260.2
Secondary Identifier:  ? PAC:36157665
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-7511 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g089260.2 0.5kb upstream 0.5kb upstream 23234 true SL2.50ch02: 51125860-51149093 Solanum lycopersicum
Solyc02g089260.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 51125860-51126359 Solanum lycopersicum
Solyc02g089260.2 0.5kb downstream 0.5kb downstream 23234 true SL2.50ch02: 51126360-51149593 Solanum lycopersicum
Solyc02g089260.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 51149094-51149593 Solanum lycopersicum
Solyc02g089260.2 1.0kb upstream 1.0kb upstream 23734 true SL2.50ch02: 51125360-51149093 Solanum lycopersicum
Solyc02g089260.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 51125360-51126359 Solanum lycopersicum
Solyc02g089260.2 1.0kb downstream 1.0kb downstream 23734 true SL2.50ch02: 51126360-51150093 Solanum lycopersicum
Solyc02g089260.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 51149094-51150093 Solanum lycopersicum
Solyc02g089260.2 2.0kb upstream 2.0kb upstream 24734 true SL2.50ch02: 51124360-51149093 Solanum lycopersicum
Solyc02g089260.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 51124360-51126359 Solanum lycopersicum
Solyc02g089260.2 2.0kb downstream 2.0kb downstream 24734 true SL2.50ch02: 51126360-51151093 Solanum lycopersicum
Solyc02g089260.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 51149094-51151093 Solanum lycopersicum
Solyc02g089260.2 5.0kb upstream 5.0kb upstream 27734 true SL2.50ch02: 51121360-51149093 Solanum lycopersicum
Solyc02g089260.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 51121360-51126359 Solanum lycopersicum
Solyc02g089260.2 5.0kb downstream 5.0kb downstream 27734 true SL2.50ch02: 51126360-51154093 Solanum lycopersicum
Solyc02g089260.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 51149094-51154093 Solanum lycopersicum
Solyc02g089260.2 10.0kb upstream 10.0kb upstream 32734 true SL2.50ch02: 51116360-51149093 Solanum lycopersicum
Solyc02g089260.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 51116360-51126359 Solanum lycopersicum
Solyc02g089260.2 10.0kb downstream 10.0kb downstream 32734 true SL2.50ch02: 51126360-51159093 Solanum lycopersicum
Solyc02g089260.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 51149094-51159093 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475939 5263 Asterids View MSA
123737535 5271 Pentapetalae View MSA
122791099 5272 Eudicot View MSA
122042481 5273 Angiosperm View MSA
121347237 5274 Embryophyte View MSA
123425333 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain