Gene : Solyc02g089870.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED Description:  RING finger protein 5 (AHRD V1 **-- B6TLS1_MAIZE); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type
Genomic Order:  2862 Name:  ? Solyc02g089870.1
Secondary Identifier:  ? PAC:36158900
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g089870.1 0.5kb upstream 0.5kb upstream 1163 true SL2.50ch02: 51565736-51566898 Solanum lycopersicum
Solyc02g089870.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 51565736-51566235 Solanum lycopersicum
Solyc02g089870.1 0.5kb downstream 0.5kb downstream 1163 true SL2.50ch02: 51566236-51567398 Solanum lycopersicum
Solyc02g089870.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 51566899-51567398 Solanum lycopersicum
Solyc02g089870.1 1.0kb upstream 1.0kb upstream 1663 true SL2.50ch02: 51565236-51566898 Solanum lycopersicum
Solyc02g089870.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 51565236-51566235 Solanum lycopersicum
Solyc02g089870.1 1.0kb downstream 1.0kb downstream 1663 true SL2.50ch02: 51566236-51567898 Solanum lycopersicum
Solyc02g089870.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 51566899-51567898 Solanum lycopersicum
Solyc02g089870.1 2.0kb upstream 2.0kb upstream 2663 true SL2.50ch02: 51564236-51566898 Solanum lycopersicum
Solyc02g089870.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 51564236-51566235 Solanum lycopersicum
Solyc02g089870.1 2.0kb downstream 2.0kb downstream 2663 true SL2.50ch02: 51566236-51568898 Solanum lycopersicum
Solyc02g089870.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 51566899-51568898 Solanum lycopersicum
Solyc02g089870.1 5.0kb upstream 5.0kb upstream 5663 true SL2.50ch02: 51561236-51566898 Solanum lycopersicum
Solyc02g089870.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 51561236-51566235 Solanum lycopersicum
Solyc02g089870.1 5.0kb downstream 5.0kb downstream 5663 true SL2.50ch02: 51566236-51571898 Solanum lycopersicum
Solyc02g089870.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 51566899-51571898 Solanum lycopersicum
Solyc02g089870.1 10.0kb upstream 10.0kb upstream 10663 true SL2.50ch02: 51556236-51566898 Solanum lycopersicum
Solyc02g089870.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 51556236-51566235 Solanum lycopersicum
Solyc02g089870.1 10.0kb downstream 10.0kb downstream 10663 true SL2.50ch02: 51566236-51576898 Solanum lycopersicum
Solyc02g089870.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 51566899-51576898 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470837 5263 Asterids View MSA
123750017 5271 Pentapetalae View MSA
122793132 5272 Eudicot View MSA
122043579 5273 Angiosperm View MSA
121350090 5274 Embryophyte View MSA
123428794 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain