Gene : Solyc02g089630.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) 1.5.5.2 - Proline dehydrogenase Description:  Proline dehydrogenase (AHRD V1 **** A1E289_ACTDE); contains Interpro domain(s) IPR015659 Proline oxidase
Genomic Order:  2838 Name:  ? Solyc02g089630.2
Secondary Identifier:  ? PAC:36157721
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum CITRULBIO-PWY Solanum lycopersicum pathologic  
Slycopersicum PROUT-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-6922 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g089630.2 0.5kb upstream 0.5kb upstream 3199 true SL2.50ch02: 51379832-51383030 Solanum lycopersicum
Solyc02g089630.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 51382531-51383030 Solanum lycopersicum
Solyc02g089630.2 0.5kb downstream 0.5kb downstream 3199 true SL2.50ch02: 51379332-51382530 Solanum lycopersicum
Solyc02g089630.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 51379332-51379831 Solanum lycopersicum
Solyc02g089630.2 1.0kb upstream 1.0kb upstream 3699 true SL2.50ch02: 51379832-51383530 Solanum lycopersicum
Solyc02g089630.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 51382531-51383530 Solanum lycopersicum
Solyc02g089630.2 1.0kb downstream 1.0kb downstream 3699 true SL2.50ch02: 51378832-51382530 Solanum lycopersicum
Solyc02g089630.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 51378832-51379831 Solanum lycopersicum
Solyc02g089630.2 2.0kb upstream 2.0kb upstream 4699 true SL2.50ch02: 51379832-51384530 Solanum lycopersicum
Solyc02g089630.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 51382531-51384530 Solanum lycopersicum
Solyc02g089630.2 2.0kb downstream 2.0kb downstream 4699 true SL2.50ch02: 51377832-51382530 Solanum lycopersicum
Solyc02g089630.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 51377832-51379831 Solanum lycopersicum
Solyc02g089630.2 5.0kb upstream 5.0kb upstream 7699 true SL2.50ch02: 51379832-51387530 Solanum lycopersicum
Solyc02g089630.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 51382531-51387530 Solanum lycopersicum
Solyc02g089630.2 5.0kb downstream 5.0kb downstream 7699 true SL2.50ch02: 51374832-51382530 Solanum lycopersicum
Solyc02g089630.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 51374832-51379831 Solanum lycopersicum
Solyc02g089630.2 10.0kb upstream 10.0kb upstream 12699 true SL2.50ch02: 51379832-51392530 Solanum lycopersicum
Solyc02g089630.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 51382531-51392530 Solanum lycopersicum
Solyc02g089630.2 10.0kb downstream 10.0kb downstream 12699 true SL2.50ch02: 51369832-51382530 Solanum lycopersicum
Solyc02g089630.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 51369832-51379831 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479002 5263 Asterids View MSA
123743697 5271 Pentapetalae View MSA
122792525 5272 Eudicot View MSA
122047709 5273 Angiosperm View MSA
121345691 5274 Embryophyte View MSA
123427745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain