Gene : Solyc02g088250.2 S. lycopersicum ITAG2.4
Defline:  (1 of 5) PTHR10783//PTHR10783:SF52 - XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED // SUBFAMILY NOT NAMED Description:  Xenotropic and polytropic retrovirus receptor (AHRD V1 *--- B2GU54_XENTR); contains Interpro domain(s) IPR004331 SPX, N-terminal
Genomic Order:  2701 Name:  ? Solyc02g088250.2
Secondary Identifier:  ? PAC:36158402
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g088250.2 0.5kb upstream 0.5kb upstream 2761 true SL2.50ch02: 50401478-50404238 Solanum lycopersicum
Solyc02g088250.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 50403739-50404238 Solanum lycopersicum
Solyc02g088250.2 0.5kb downstream 0.5kb downstream 2761 true SL2.50ch02: 50400978-50403738 Solanum lycopersicum
Solyc02g088250.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 50400978-50401477 Solanum lycopersicum
Solyc02g088250.2 1.0kb upstream 1.0kb upstream 3261 true SL2.50ch02: 50401478-50404738 Solanum lycopersicum
Solyc02g088250.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 50403739-50404738 Solanum lycopersicum
Solyc02g088250.2 1.0kb downstream 1.0kb downstream 3261 true SL2.50ch02: 50400478-50403738 Solanum lycopersicum
Solyc02g088250.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 50400478-50401477 Solanum lycopersicum
Solyc02g088250.2 2.0kb upstream 2.0kb upstream 4261 true SL2.50ch02: 50401478-50405738 Solanum lycopersicum
Solyc02g088250.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 50403739-50405738 Solanum lycopersicum
Solyc02g088250.2 2.0kb downstream 2.0kb downstream 4261 true SL2.50ch02: 50399478-50403738 Solanum lycopersicum
Solyc02g088250.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 50399478-50401477 Solanum lycopersicum
Solyc02g088250.2 5.0kb upstream 5.0kb upstream 7261 true SL2.50ch02: 50401478-50408738 Solanum lycopersicum
Solyc02g088250.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 50403739-50408738 Solanum lycopersicum
Solyc02g088250.2 5.0kb downstream 5.0kb downstream 7261 true SL2.50ch02: 50396478-50403738 Solanum lycopersicum
Solyc02g088250.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 50396478-50401477 Solanum lycopersicum
Solyc02g088250.2 10.0kb upstream 10.0kb upstream 12261 true SL2.50ch02: 50401478-50413738 Solanum lycopersicum
Solyc02g088250.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 50403739-50413738 Solanum lycopersicum
Solyc02g088250.2 10.0kb downstream 10.0kb downstream 12261 true SL2.50ch02: 50391478-50403738 Solanum lycopersicum
Solyc02g088250.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 50391478-50401477 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779756 5273 Angiosperm View MSA
121414211 5263 Asterids View MSA
123744099 5271 Pentapetalae View MSA
122770902 5272 Eudicot View MSA
121051396 5274 Embryophyte View MSA
123091486 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain