Gene : Solyc02g090070.2 S. lycopersicum ITAG2.4
Defline:  (1 of 31) PF03000 - NPH3 family (NPH3) Description:  Phototropic-responsive NPH3 family protein (AHRD V1 **-- D7MMF7_ARALY); contains Interpro domain(s) IPR004249 NPH3
Genomic Order:  2882 Name:  ? Solyc02g090070.2
Secondary Identifier:  ? PAC:36156961
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g090070.2 0.5kb upstream 0.5kb upstream 3313 true SL2.50ch02: 51714109-51717421 Solanum lycopersicum
Solyc02g090070.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 51716922-51717421 Solanum lycopersicum
Solyc02g090070.2 0.5kb downstream 0.5kb downstream 3313 true SL2.50ch02: 51713609-51716921 Solanum lycopersicum
Solyc02g090070.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 51713609-51714108 Solanum lycopersicum
Solyc02g090070.2 1.0kb upstream 1.0kb upstream 3813 true SL2.50ch02: 51714109-51717921 Solanum lycopersicum
Solyc02g090070.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 51716922-51717921 Solanum lycopersicum
Solyc02g090070.2 1.0kb downstream 1.0kb downstream 3813 true SL2.50ch02: 51713109-51716921 Solanum lycopersicum
Solyc02g090070.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 51713109-51714108 Solanum lycopersicum
Solyc02g090070.2 2.0kb upstream 2.0kb upstream 4813 true SL2.50ch02: 51714109-51718921 Solanum lycopersicum
Solyc02g090070.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 51716922-51718921 Solanum lycopersicum
Solyc02g090070.2 2.0kb downstream 2.0kb downstream 4813 true SL2.50ch02: 51712109-51716921 Solanum lycopersicum
Solyc02g090070.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 51712109-51714108 Solanum lycopersicum
Solyc02g090070.2 5.0kb upstream 5.0kb upstream 7813 true SL2.50ch02: 51714109-51721921 Solanum lycopersicum
Solyc02g090070.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 51716922-51721921 Solanum lycopersicum
Solyc02g090070.2 5.0kb downstream 5.0kb downstream 7813 true SL2.50ch02: 51709109-51716921 Solanum lycopersicum
Solyc02g090070.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 51709109-51714108 Solanum lycopersicum
Solyc02g090070.2 10.0kb upstream 10.0kb upstream 12813 true SL2.50ch02: 51714109-51726921 Solanum lycopersicum
Solyc02g090070.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 51716922-51726921 Solanum lycopersicum
Solyc02g090070.2 10.0kb downstream 10.0kb downstream 12813 true SL2.50ch02: 51704109-51716921 Solanum lycopersicum
Solyc02g090070.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 51704109-51714108 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469948 5263 Asterids View MSA
123740597 5271 Pentapetalae View MSA
122793166 5272 Eudicot View MSA
122048903 5273 Angiosperm View MSA
121311163 5274 Embryophyte View MSA
123348497 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain