Gene : Solyc02g085350.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K00234 - succinate dehydrogenase (ubiquinone) flavoprotein subunit (SDHA, SDH1) Description:  Succinate dehydrogenase flavoprotein subunit (AHRD V1 **** B8CCT7_THAPS); contains Interpro domain(s) IPR011281 Succinate dehydrogenase, flavoprotein subunit
Genomic Order:  2412 Name:  ? Solyc02g085350.2
Secondary Identifier:  ? PAC:36156466
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-3781 Solanum lycopersicum pathologic  
Slycopersicum PWY-4302 Solanum lycopersicum pathologic  
Slycopersicum PWY-5464 Solanum lycopersicum pathologic  
Slycopersicum PWY-561 Solanum lycopersicum pathologic  
Slycopersicum PWY-5690 Solanum lycopersicum pathologic  
Slycopersicum PWY-7279 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g085350.2 0.5kb upstream 0.5kb upstream 7731 true SL2.50ch02: 48270135-48277865 Solanum lycopersicum
Solyc02g085350.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 48277366-48277865 Solanum lycopersicum
Solyc02g085350.2 0.5kb downstream 0.5kb downstream 7731 true SL2.50ch02: 48269635-48277365 Solanum lycopersicum
Solyc02g085350.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 48269635-48270134 Solanum lycopersicum
Solyc02g085350.2 1.0kb upstream 1.0kb upstream 8231 true SL2.50ch02: 48270135-48278365 Solanum lycopersicum
Solyc02g085350.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 48277366-48278365 Solanum lycopersicum
Solyc02g085350.2 1.0kb downstream 1.0kb downstream 8231 true SL2.50ch02: 48269135-48277365 Solanum lycopersicum
Solyc02g085350.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 48269135-48270134 Solanum lycopersicum
Solyc02g085350.2 2.0kb upstream 2.0kb upstream 9231 true SL2.50ch02: 48270135-48279365 Solanum lycopersicum
Solyc02g085350.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 48277366-48279365 Solanum lycopersicum
Solyc02g085350.2 2.0kb downstream 2.0kb downstream 9231 true SL2.50ch02: 48268135-48277365 Solanum lycopersicum
Solyc02g085350.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 48268135-48270134 Solanum lycopersicum
Solyc02g085350.2 5.0kb upstream 5.0kb upstream 12231 true SL2.50ch02: 48270135-48282365 Solanum lycopersicum
Solyc02g085350.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 48277366-48282365 Solanum lycopersicum
Solyc02g085350.2 5.0kb downstream 5.0kb downstream 12231 true SL2.50ch02: 48265135-48277365 Solanum lycopersicum
Solyc02g085350.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 48265135-48270134 Solanum lycopersicum
Solyc02g085350.2 10.0kb upstream 10.0kb upstream 17231 true SL2.50ch02: 48270135-48287365 Solanum lycopersicum
Solyc02g085350.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 48277366-48287365 Solanum lycopersicum
Solyc02g085350.2 10.0kb downstream 10.0kb downstream 17231 true SL2.50ch02: 48260135-48277365 Solanum lycopersicum
Solyc02g085350.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 48260135-48270134 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472778 5263 Asterids View MSA
123753034 5271 Pentapetalae View MSA
122790960 5272 Eudicot View MSA
122043363 5273 Angiosperm View MSA
121346345 5274 Embryophyte View MSA
123424943 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain