Gene : Solyc02g085130.2 S. lycopersicum ITAG2.4
Defline:  (1 of 4) PTHR16517:SF40 - TUBBY-LIKE F-BOX PROTEIN 11-RELATED Description:  Tubby-like F-box protein 5 (AHRD V1 ***- TLP5_ORYSJ); contains Interpro domain(s) IPR000007 Tubby, C-terminal
Genomic Order:  2391 Name:  ? Solyc02g085130.2
Secondary Identifier:  ? PAC:36157196
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g085130.2 0.5kb upstream 0.5kb upstream 2648 true SL2.50ch02: 48111127-48113774 Solanum lycopersicum
Solyc02g085130.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 48111127-48111626 Solanum lycopersicum
Solyc02g085130.2 0.5kb downstream 0.5kb downstream 2648 true SL2.50ch02: 48111627-48114274 Solanum lycopersicum
Solyc02g085130.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 48113775-48114274 Solanum lycopersicum
Solyc02g085130.2 1.0kb upstream 1.0kb upstream 3148 true SL2.50ch02: 48110627-48113774 Solanum lycopersicum
Solyc02g085130.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 48110627-48111626 Solanum lycopersicum
Solyc02g085130.2 1.0kb downstream 1.0kb downstream 3148 true SL2.50ch02: 48111627-48114774 Solanum lycopersicum
Solyc02g085130.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 48113775-48114774 Solanum lycopersicum
Solyc02g085130.2 2.0kb upstream 2.0kb upstream 4148 true SL2.50ch02: 48109627-48113774 Solanum lycopersicum
Solyc02g085130.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 48109627-48111626 Solanum lycopersicum
Solyc02g085130.2 2.0kb downstream 2.0kb downstream 4148 true SL2.50ch02: 48111627-48115774 Solanum lycopersicum
Solyc02g085130.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 48113775-48115774 Solanum lycopersicum
Solyc02g085130.2 5.0kb upstream 5.0kb upstream 7148 true SL2.50ch02: 48106627-48113774 Solanum lycopersicum
Solyc02g085130.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 48106627-48111626 Solanum lycopersicum
Solyc02g085130.2 5.0kb downstream 5.0kb downstream 7148 true SL2.50ch02: 48111627-48118774 Solanum lycopersicum
Solyc02g085130.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 48113775-48118774 Solanum lycopersicum
Solyc02g085130.2 10.0kb upstream 10.0kb upstream 12148 true SL2.50ch02: 48101627-48113774 Solanum lycopersicum
Solyc02g085130.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 48101627-48111626 Solanum lycopersicum
Solyc02g085130.2 10.0kb downstream 10.0kb downstream 12148 true SL2.50ch02: 48111627-48123774 Solanum lycopersicum
Solyc02g085130.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 48113775-48123774 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479357 5263 Asterids View MSA
123747341 5271 Pentapetalae View MSA
122790799 5272 Eudicot View MSA
122049170 5273 Angiosperm View MSA
123429062 5275 Viridiplantae View MSA
121348967 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain