Gene : Solyc02g085730.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 5.3.99.6 - Allene-oxide cyclase Description:  Allene oxide cyclase (AHRD V1 **** Q9LEG5_SOLLC); contains Interpro domain(s) IPR009410 Allene oxide cyclase
Genomic Order:  2450 Name:  ? Solyc02g085730.2
Secondary Identifier:  ? PAC:36157754
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-735 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g085730.2 0.5kb upstream 0.5kb upstream 2832 true SL2.50ch02: 48531186-48534017 Solanum lycopersicum
Solyc02g085730.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 48531186-48531685 Solanum lycopersicum
Solyc02g085730.2 0.5kb downstream 0.5kb downstream 2832 true SL2.50ch02: 48531686-48534517 Solanum lycopersicum
Solyc02g085730.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 48534018-48534517 Solanum lycopersicum
Solyc02g085730.2 1.0kb upstream 1.0kb upstream 3332 true SL2.50ch02: 48530686-48534017 Solanum lycopersicum
Solyc02g085730.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 48530686-48531685 Solanum lycopersicum
Solyc02g085730.2 1.0kb downstream 1.0kb downstream 3332 true SL2.50ch02: 48531686-48535017 Solanum lycopersicum
Solyc02g085730.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 48534018-48535017 Solanum lycopersicum
Solyc02g085730.2 2.0kb upstream 2.0kb upstream 4332 true SL2.50ch02: 48529686-48534017 Solanum lycopersicum
Solyc02g085730.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 48529686-48531685 Solanum lycopersicum
Solyc02g085730.2 2.0kb downstream 2.0kb downstream 4332 true SL2.50ch02: 48531686-48536017 Solanum lycopersicum
Solyc02g085730.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 48534018-48536017 Solanum lycopersicum
Solyc02g085730.2 5.0kb upstream 5.0kb upstream 7332 true SL2.50ch02: 48526686-48534017 Solanum lycopersicum
Solyc02g085730.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 48526686-48531685 Solanum lycopersicum
Solyc02g085730.2 5.0kb downstream 5.0kb downstream 7332 true SL2.50ch02: 48531686-48539017 Solanum lycopersicum
Solyc02g085730.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 48534018-48539017 Solanum lycopersicum
Solyc02g085730.2 10.0kb upstream 10.0kb upstream 12332 true SL2.50ch02: 48521686-48534017 Solanum lycopersicum
Solyc02g085730.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 48521686-48531685 Solanum lycopersicum
Solyc02g085730.2 10.0kb downstream 10.0kb downstream 12332 true SL2.50ch02: 48531686-48544017 Solanum lycopersicum
Solyc02g085730.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 48534018-48544017 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480389 5263 Asterids View MSA
123739753 5271 Pentapetalae View MSA
122789032 5272 Eudicot View MSA
122045897 5273 Angiosperm View MSA
121350459 5274 Embryophyte View MSA
123426138 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain