Gene : Solyc02g085560.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K14721 - DNA-directed RNA polymerase III subunit RPC5 (RPC5, POLR3E) Description:  DNA-directed RNA polymerase III subunit RPC5-like protein (AHRD V1 *-*- D0NBY8_PHYIN); contains Interpro domain(s) IPR006886 Sin-like protein conserved region
Genomic Order:  2433 Name:  ? Solyc02g085560.2
Secondary Identifier:  ? PAC:36159099
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g085560.2 0.5kb upstream 0.5kb upstream 13749 true SL2.50ch02: 48386499-48400247 Solanum lycopersicum
Solyc02g085560.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 48386499-48386998 Solanum lycopersicum
Solyc02g085560.2 0.5kb downstream 0.5kb downstream 13749 true SL2.50ch02: 48386999-48400747 Solanum lycopersicum
Solyc02g085560.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 48400248-48400747 Solanum lycopersicum
Solyc02g085560.2 1.0kb upstream 1.0kb upstream 14249 true SL2.50ch02: 48385999-48400247 Solanum lycopersicum
Solyc02g085560.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 48385999-48386998 Solanum lycopersicum
Solyc02g085560.2 1.0kb downstream 1.0kb downstream 14249 true SL2.50ch02: 48386999-48401247 Solanum lycopersicum
Solyc02g085560.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 48400248-48401247 Solanum lycopersicum
Solyc02g085560.2 2.0kb upstream 2.0kb upstream 15249 true SL2.50ch02: 48384999-48400247 Solanum lycopersicum
Solyc02g085560.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 48384999-48386998 Solanum lycopersicum
Solyc02g085560.2 2.0kb downstream 2.0kb downstream 15249 true SL2.50ch02: 48386999-48402247 Solanum lycopersicum
Solyc02g085560.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 48400248-48402247 Solanum lycopersicum
Solyc02g085560.2 5.0kb upstream 5.0kb upstream 18249 true SL2.50ch02: 48381999-48400247 Solanum lycopersicum
Solyc02g085560.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 48381999-48386998 Solanum lycopersicum
Solyc02g085560.2 5.0kb downstream 5.0kb downstream 18249 true SL2.50ch02: 48386999-48405247 Solanum lycopersicum
Solyc02g085560.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 48400248-48405247 Solanum lycopersicum
Solyc02g085560.2 10.0kb upstream 10.0kb upstream 23249 true SL2.50ch02: 48376999-48400247 Solanum lycopersicum
Solyc02g085560.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 48376999-48386998 Solanum lycopersicum
Solyc02g085560.2 10.0kb downstream 10.0kb downstream 23249 true SL2.50ch02: 48386999-48410247 Solanum lycopersicum
Solyc02g085560.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 48400248-48410247 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121365831 5263 Asterids Singleton cluster - no MSA
123749161 5271 Pentapetalae View MSA
122792104 5272 Eudicot View MSA
122041798 5273 Angiosperm View MSA
123429138 5275 Viridiplantae View MSA
121344108 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain