Gene : Solyc02g086730.1 S. lycopersicum ITAG2.4

Defline:  (1 of 7) K02935 - large subunit ribosomal protein L7/L12 (RP-L7, MRPL12, rplL) Description:  50S ribosomal protein L12-C (AHRD V1 ***- Q8LBJ7_ARATH); contains Interpro domain(s) IPR015608 Ribosomal protein L12, chloroplast
Genomic Order:  2549 Name:  ? Solyc02g086730.1
Secondary Identifier:  ? PAC:36156660

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g086730.1 0.5kb upstream 0.5kb upstream 1073 true SL2.50ch02: 49359181-49360253 Solanum lycopersicum
Solyc02g086730.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 49359181-49359680 Solanum lycopersicum
Solyc02g086730.1 0.5kb downstream 0.5kb downstream 1073 true SL2.50ch02: 49359681-49360753 Solanum lycopersicum
Solyc02g086730.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 49360254-49360753 Solanum lycopersicum
Solyc02g086730.1 1.0kb upstream 1.0kb upstream 1573 true SL2.50ch02: 49358681-49360253 Solanum lycopersicum
Solyc02g086730.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 49358681-49359680 Solanum lycopersicum
Solyc02g086730.1 1.0kb downstream 1.0kb downstream 1573 true SL2.50ch02: 49359681-49361253 Solanum lycopersicum
Solyc02g086730.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 49360254-49361253 Solanum lycopersicum
Solyc02g086730.1 2.0kb upstream 2.0kb upstream 2573 true SL2.50ch02: 49357681-49360253 Solanum lycopersicum
Solyc02g086730.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 49357681-49359680 Solanum lycopersicum
Solyc02g086730.1 2.0kb downstream 2.0kb downstream 2573 true SL2.50ch02: 49359681-49362253 Solanum lycopersicum
Solyc02g086730.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 49360254-49362253 Solanum lycopersicum
Solyc02g086730.1 5.0kb upstream 5.0kb upstream 5573 true SL2.50ch02: 49354681-49360253 Solanum lycopersicum
Solyc02g086730.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 49354681-49359680 Solanum lycopersicum
Solyc02g086730.1 5.0kb downstream 5.0kb downstream 5573 true SL2.50ch02: 49359681-49365253 Solanum lycopersicum
Solyc02g086730.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 49360254-49365253 Solanum lycopersicum
Solyc02g086730.1 10.0kb upstream 10.0kb upstream 10573 true SL2.50ch02: 49349681-49360253 Solanum lycopersicum
Solyc02g086730.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 49349681-49359680 Solanum lycopersicum
Solyc02g086730.1 10.0kb downstream 10.0kb downstream 10573 true SL2.50ch02: 49359681-49370253 Solanum lycopersicum
Solyc02g086730.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 49360254-49370253 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479994 5263 Asterids View MSA
123741496 5271 Pentapetalae View MSA
122791923 5272 Eudicot View MSA
122049656 5273 Angiosperm View MSA
121351043 5274 Embryophyte View MSA
123427211 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain