Gene : Solyc02g086640.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K07442 - tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220] (TRM61, GCD14) Description:  tRNA adenine-N1 methyltransferase catalytic subunit TRM61 (AHRD V1 ***- C1C0S4_9MAXI); contains Interpro domain(s) IPR014816 tRNA methyltransferase complex GCD14 subunit
Genomic Order:  2540 Name:  ? Solyc02g086640.2
Secondary Identifier:  ? PAC:36158256
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-6829 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g086640.2 0.5kb upstream 0.5kb upstream 2681 true SL2.50ch02: 49296794-49299474 Solanum lycopersicum
Solyc02g086640.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 49296794-49297293 Solanum lycopersicum
Solyc02g086640.2 0.5kb downstream 0.5kb downstream 2681 true SL2.50ch02: 49297294-49299974 Solanum lycopersicum
Solyc02g086640.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 49299475-49299974 Solanum lycopersicum
Solyc02g086640.2 1.0kb upstream 1.0kb upstream 3181 true SL2.50ch02: 49296294-49299474 Solanum lycopersicum
Solyc02g086640.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 49296294-49297293 Solanum lycopersicum
Solyc02g086640.2 1.0kb downstream 1.0kb downstream 3181 true SL2.50ch02: 49297294-49300474 Solanum lycopersicum
Solyc02g086640.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 49299475-49300474 Solanum lycopersicum
Solyc02g086640.2 2.0kb upstream 2.0kb upstream 4181 true SL2.50ch02: 49295294-49299474 Solanum lycopersicum
Solyc02g086640.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 49295294-49297293 Solanum lycopersicum
Solyc02g086640.2 2.0kb downstream 2.0kb downstream 4181 true SL2.50ch02: 49297294-49301474 Solanum lycopersicum
Solyc02g086640.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 49299475-49301474 Solanum lycopersicum
Solyc02g086640.2 5.0kb upstream 5.0kb upstream 7181 true SL2.50ch02: 49292294-49299474 Solanum lycopersicum
Solyc02g086640.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 49292294-49297293 Solanum lycopersicum
Solyc02g086640.2 5.0kb downstream 5.0kb downstream 7181 true SL2.50ch02: 49297294-49304474 Solanum lycopersicum
Solyc02g086640.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 49299475-49304474 Solanum lycopersicum
Solyc02g086640.2 10.0kb upstream 10.0kb upstream 12181 true SL2.50ch02: 49287294-49299474 Solanum lycopersicum
Solyc02g086640.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 49287294-49297293 Solanum lycopersicum
Solyc02g086640.2 10.0kb downstream 10.0kb downstream 12181 true SL2.50ch02: 49297294-49309474 Solanum lycopersicum
Solyc02g086640.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 49299475-49309474 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473703 5263 Asterids View MSA
123740177 5271 Pentapetalae View MSA
122793445 5272 Eudicot View MSA
122045272 5273 Angiosperm View MSA
121345508 5274 Embryophyte View MSA
123423922 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain