Gene : Solyc01g096830.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 3.6.3.7 - Sodium-exporting ATPase / Sodium-translocating P-type ATPase Description:  Calcium-transporting ATPase 1 (AHRD V1 *-** ATC1_YEAST); contains Interpro domain(s) IPR006544 ATPase, P-type, unknown pump specificity (type V)
Genomic Order:  2837 Name:  ? Solyc01g096830.2
Secondary Identifier:  ? PAC:36138875
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g096830.2 0.5kb upstream 0.5kb upstream 16794 true SL2.50ch01: 87821667-87838460 Solanum lycopersicum
Solyc01g096830.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 87837961-87838460 Solanum lycopersicum
Solyc01g096830.2 0.5kb downstream 0.5kb downstream 16794 true SL2.50ch01: 87821167-87837960 Solanum lycopersicum
Solyc01g096830.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 87821167-87821666 Solanum lycopersicum
Solyc01g096830.2 1.0kb upstream 1.0kb upstream 17294 true SL2.50ch01: 87821667-87838960 Solanum lycopersicum
Solyc01g096830.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 87837961-87838960 Solanum lycopersicum
Solyc01g096830.2 1.0kb downstream 1.0kb downstream 17294 true SL2.50ch01: 87820667-87837960 Solanum lycopersicum
Solyc01g096830.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 87820667-87821666 Solanum lycopersicum
Solyc01g096830.2 2.0kb upstream 2.0kb upstream 18294 true SL2.50ch01: 87821667-87839960 Solanum lycopersicum
Solyc01g096830.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 87837961-87839960 Solanum lycopersicum
Solyc01g096830.2 2.0kb downstream 2.0kb downstream 18294 true SL2.50ch01: 87819667-87837960 Solanum lycopersicum
Solyc01g096830.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 87819667-87821666 Solanum lycopersicum
Solyc01g096830.2 5.0kb upstream 5.0kb upstream 21294 true SL2.50ch01: 87821667-87842960 Solanum lycopersicum
Solyc01g096830.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 87837961-87842960 Solanum lycopersicum
Solyc01g096830.2 5.0kb downstream 5.0kb downstream 21294 true SL2.50ch01: 87816667-87837960 Solanum lycopersicum
Solyc01g096830.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 87816667-87821666 Solanum lycopersicum
Solyc01g096830.2 10.0kb upstream 10.0kb upstream 26294 true SL2.50ch01: 87821667-87847960 Solanum lycopersicum
Solyc01g096830.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 87837961-87847960 Solanum lycopersicum
Solyc01g096830.2 10.0kb downstream 10.0kb downstream 26294 true SL2.50ch01: 87811667-87837960 Solanum lycopersicum
Solyc01g096830.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 87811667-87821666 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026494 5273 Angiosperm View MSA
121472558 5263 Asterids View MSA
123739596 5271 Pentapetalae View MSA
122790607 5272 Eudicot View MSA
121344570 5274 Embryophyte View MSA
123424459 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain