Gene : Solyc01g096840.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR31807:SF6 - PROTEIN ENDOSPERM DEFECTIVE 1-RELATED Description:  Os02g0794300 protein (Fragment) (AHRD V1 *-*- Q0DWU9_ORYSJ); contains Interpro domain(s) IPR007573 Protein of unknown function DUF566
Genomic Order:  2838 Name:  ? Solyc01g096840.2
Secondary Identifier:  ? PAC:36140985
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g096840.2 0.5kb upstream 0.5kb upstream 2481 true SL2.50ch01: 87839463-87841943 Solanum lycopersicum
Solyc01g096840.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 87841444-87841943 Solanum lycopersicum
Solyc01g096840.2 0.5kb downstream 0.5kb downstream 2481 true SL2.50ch01: 87838963-87841443 Solanum lycopersicum
Solyc01g096840.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 87838963-87839462 Solanum lycopersicum
Solyc01g096840.2 1.0kb upstream 1.0kb upstream 2981 true SL2.50ch01: 87839463-87842443 Solanum lycopersicum
Solyc01g096840.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 87841444-87842443 Solanum lycopersicum
Solyc01g096840.2 1.0kb downstream 1.0kb downstream 2981 true SL2.50ch01: 87838463-87841443 Solanum lycopersicum
Solyc01g096840.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 87838463-87839462 Solanum lycopersicum
Solyc01g096840.2 2.0kb upstream 2.0kb upstream 3981 true SL2.50ch01: 87839463-87843443 Solanum lycopersicum
Solyc01g096840.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 87841444-87843443 Solanum lycopersicum
Solyc01g096840.2 2.0kb downstream 2.0kb downstream 3981 true SL2.50ch01: 87837463-87841443 Solanum lycopersicum
Solyc01g096840.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 87837463-87839462 Solanum lycopersicum
Solyc01g096840.2 5.0kb upstream 5.0kb upstream 6981 true SL2.50ch01: 87839463-87846443 Solanum lycopersicum
Solyc01g096840.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 87841444-87846443 Solanum lycopersicum
Solyc01g096840.2 5.0kb downstream 5.0kb downstream 6981 true SL2.50ch01: 87834463-87841443 Solanum lycopersicum
Solyc01g096840.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 87834463-87839462 Solanum lycopersicum
Solyc01g096840.2 10.0kb upstream 10.0kb upstream 11981 true SL2.50ch01: 87839463-87851443 Solanum lycopersicum
Solyc01g096840.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 87841444-87851443 Solanum lycopersicum
Solyc01g096840.2 10.0kb downstream 10.0kb downstream 11981 true SL2.50ch01: 87829463-87841443 Solanum lycopersicum
Solyc01g096840.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 87829463-87839462 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475618 5263 Asterids View MSA
123752575 5271 Pentapetalae View MSA
122788375 5272 Eudicot View MSA
122044458 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain