Gene : Solyc02g082970.1 S. lycopersicum ITAG2.4
Defline:  (1 of 420) PF13041 - PPR repeat family (PPR_2) Description:  Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7L9H0_ARALY); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
Genomic Order:  2178 Name:  ? Solyc02g082970.1
Secondary Identifier:  ? PAC:36157019
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g082970.1 0.5kb upstream 0.5kb upstream 1910 true SL2.50ch02: 46568287-46570196 Solanum lycopersicum
Solyc02g082970.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 46568287-46568786 Solanum lycopersicum
Solyc02g082970.1 0.5kb downstream 0.5kb downstream 1910 true SL2.50ch02: 46568787-46570696 Solanum lycopersicum
Solyc02g082970.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 46570197-46570696 Solanum lycopersicum
Solyc02g082970.1 1.0kb upstream 1.0kb upstream 2410 true SL2.50ch02: 46567787-46570196 Solanum lycopersicum
Solyc02g082970.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 46567787-46568786 Solanum lycopersicum
Solyc02g082970.1 1.0kb downstream 1.0kb downstream 2410 true SL2.50ch02: 46568787-46571196 Solanum lycopersicum
Solyc02g082970.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 46570197-46571196 Solanum lycopersicum
Solyc02g082970.1 2.0kb upstream 2.0kb upstream 3410 true SL2.50ch02: 46566787-46570196 Solanum lycopersicum
Solyc02g082970.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 46566787-46568786 Solanum lycopersicum
Solyc02g082970.1 2.0kb downstream 2.0kb downstream 3410 true SL2.50ch02: 46568787-46572196 Solanum lycopersicum
Solyc02g082970.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 46570197-46572196 Solanum lycopersicum
Solyc02g082970.1 5.0kb upstream 5.0kb upstream 6410 true SL2.50ch02: 46563787-46570196 Solanum lycopersicum
Solyc02g082970.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 46563787-46568786 Solanum lycopersicum
Solyc02g082970.1 5.0kb downstream 5.0kb downstream 6410 true SL2.50ch02: 46568787-46575196 Solanum lycopersicum
Solyc02g082970.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 46570197-46575196 Solanum lycopersicum
Solyc02g082970.1 10.0kb upstream 10.0kb upstream 11410 true SL2.50ch02: 46558787-46570196 Solanum lycopersicum
Solyc02g082970.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 46558787-46568786 Solanum lycopersicum
Solyc02g082970.1 10.0kb downstream 10.0kb downstream 11410 true SL2.50ch02: 46568787-46580196 Solanum lycopersicum
Solyc02g082970.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 46570197-46580196 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471463 5263 Asterids View MSA
123739053 5271 Pentapetalae View MSA
122787192 5272 Eudicot View MSA
122046913 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain