Gene : Solyc02g083340.2 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR18896:SF60 - PHOSPHOLIPASE D DELTA Description:  Phospholipase D (AHRD V1 **** Q6AVR2_ORYSJ); contains Interpro domain(s) IPR011402 Phospholipase D, plant
Genomic Order:  2215 Name:  ? Solyc02g083340.2
Secondary Identifier:  ? PAC:36159245
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum LIPASYN-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-3561 Solanum lycopersicum pathologic  
Slycopersicum PWY-7039 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g083340.2 0.5kb upstream 0.5kb upstream 8671 true SL2.50ch02: 46779414-46788084 Solanum lycopersicum
Solyc02g083340.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 46787585-46788084 Solanum lycopersicum
Solyc02g083340.2 0.5kb downstream 0.5kb downstream 8671 true SL2.50ch02: 46778914-46787584 Solanum lycopersicum
Solyc02g083340.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 46778914-46779413 Solanum lycopersicum
Solyc02g083340.2 1.0kb upstream 1.0kb upstream 9171 true SL2.50ch02: 46779414-46788584 Solanum lycopersicum
Solyc02g083340.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 46787585-46788584 Solanum lycopersicum
Solyc02g083340.2 1.0kb downstream 1.0kb downstream 9171 true SL2.50ch02: 46778414-46787584 Solanum lycopersicum
Solyc02g083340.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 46778414-46779413 Solanum lycopersicum
Solyc02g083340.2 2.0kb upstream 2.0kb upstream 10171 true SL2.50ch02: 46779414-46789584 Solanum lycopersicum
Solyc02g083340.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 46787585-46789584 Solanum lycopersicum
Solyc02g083340.2 2.0kb downstream 2.0kb downstream 10171 true SL2.50ch02: 46777414-46787584 Solanum lycopersicum
Solyc02g083340.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 46777414-46779413 Solanum lycopersicum
Solyc02g083340.2 5.0kb upstream 5.0kb upstream 13171 true SL2.50ch02: 46779414-46792584 Solanum lycopersicum
Solyc02g083340.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 46787585-46792584 Solanum lycopersicum
Solyc02g083340.2 5.0kb downstream 5.0kb downstream 13171 true SL2.50ch02: 46774414-46787584 Solanum lycopersicum
Solyc02g083340.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 46774414-46779413 Solanum lycopersicum
Solyc02g083340.2 10.0kb upstream 10.0kb upstream 18171 true SL2.50ch02: 46779414-46797584 Solanum lycopersicum
Solyc02g083340.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 46787585-46797584 Solanum lycopersicum
Solyc02g083340.2 10.0kb downstream 10.0kb downstream 18171 true SL2.50ch02: 46769414-46787584 Solanum lycopersicum
Solyc02g083340.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 46769414-46779413 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466427 5263 Asterids View MSA
123749606 5271 Pentapetalae View MSA
122795845 5272 Eudicot View MSA
122049262 5273 Angiosperm View MSA
121347041 5274 Embryophyte View MSA
123380485 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain