Gene : Solyc01g060280.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR12947:SF4 - REGULATOR OF FREE UBIQUITIN CHAINS 1 Description:  STAM binding protein (AHRD V1 *--* B2W8T5_PYRTR); contains Interpro domain(s) IPR000555 Mov34/MPN/PAD-1
Genomic Order:  1492 Name:  ? Solyc01g060280.2
Secondary Identifier:  ? PAC:36137904
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g060280.2 0.5kb upstream 0.5kb upstream 13147 true SL2.50ch01: 69899192-69912338 Solanum lycopersicum
Solyc01g060280.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 69899192-69899691 Solanum lycopersicum
Solyc01g060280.2 0.5kb downstream 0.5kb downstream 13147 true SL2.50ch01: 69899692-69912838 Solanum lycopersicum
Solyc01g060280.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 69912339-69912838 Solanum lycopersicum
Solyc01g060280.2 1.0kb upstream 1.0kb upstream 13647 true SL2.50ch01: 69898692-69912338 Solanum lycopersicum
Solyc01g060280.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 69898692-69899691 Solanum lycopersicum
Solyc01g060280.2 1.0kb downstream 1.0kb downstream 13647 true SL2.50ch01: 69899692-69913338 Solanum lycopersicum
Solyc01g060280.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 69912339-69913338 Solanum lycopersicum
Solyc01g060280.2 2.0kb upstream 2.0kb upstream 14647 true SL2.50ch01: 69897692-69912338 Solanum lycopersicum
Solyc01g060280.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 69897692-69899691 Solanum lycopersicum
Solyc01g060280.2 2.0kb downstream 2.0kb downstream 14647 true SL2.50ch01: 69899692-69914338 Solanum lycopersicum
Solyc01g060280.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 69912339-69914338 Solanum lycopersicum
Solyc01g060280.2 5.0kb upstream 5.0kb upstream 17647 true SL2.50ch01: 69894692-69912338 Solanum lycopersicum
Solyc01g060280.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 69894692-69899691 Solanum lycopersicum
Solyc01g060280.2 5.0kb downstream 5.0kb downstream 17647 true SL2.50ch01: 69899692-69917338 Solanum lycopersicum
Solyc01g060280.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 69912339-69917338 Solanum lycopersicum
Solyc01g060280.2 10.0kb upstream 10.0kb upstream 22647 true SL2.50ch01: 69889692-69912338 Solanum lycopersicum
Solyc01g060280.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 69889692-69899691 Solanum lycopersicum
Solyc01g060280.2 10.0kb downstream 10.0kb downstream 22647 true SL2.50ch01: 69899692-69922338 Solanum lycopersicum
Solyc01g060280.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 69912339-69922338 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474734 5263 Asterids View MSA
123740701 5271 Pentapetalae View MSA
122792659 5272 Eudicot View MSA
122049356 5273 Angiosperm View MSA
121351478 5274 Embryophyte View MSA
123425499 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain