Gene : Solyc01g100330.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K12848 - U4/U6.U5 tri-snRNP component SNU23 (SNU23) Description:  Zinc finger matrin type 2 (AHRD V1 ***- Q6DEN8_XENTR); contains Interpro domain(s) IPR003604 Zinc finger, U1-type
Genomic Order:  3186 Name:  ? Solyc01g100330.2
Secondary Identifier:  ? PAC:36139998
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g100330.2 0.5kb upstream 0.5kb upstream 6637 true SL2.50ch01: 90394391-90401027 Solanum lycopersicum
Solyc01g100330.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 90394391-90394890 Solanum lycopersicum
Solyc01g100330.2 0.5kb downstream 0.5kb downstream 6637 true SL2.50ch01: 90394891-90401527 Solanum lycopersicum
Solyc01g100330.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 90401028-90401527 Solanum lycopersicum
Solyc01g100330.2 1.0kb upstream 1.0kb upstream 7137 true SL2.50ch01: 90393891-90401027 Solanum lycopersicum
Solyc01g100330.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 90393891-90394890 Solanum lycopersicum
Solyc01g100330.2 1.0kb downstream 1.0kb downstream 7137 true SL2.50ch01: 90394891-90402027 Solanum lycopersicum
Solyc01g100330.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 90401028-90402027 Solanum lycopersicum
Solyc01g100330.2 2.0kb upstream 2.0kb upstream 8137 true SL2.50ch01: 90392891-90401027 Solanum lycopersicum
Solyc01g100330.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 90392891-90394890 Solanum lycopersicum
Solyc01g100330.2 2.0kb downstream 2.0kb downstream 8137 true SL2.50ch01: 90394891-90403027 Solanum lycopersicum
Solyc01g100330.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 90401028-90403027 Solanum lycopersicum
Solyc01g100330.2 5.0kb upstream 5.0kb upstream 11137 true SL2.50ch01: 90389891-90401027 Solanum lycopersicum
Solyc01g100330.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 90389891-90394890 Solanum lycopersicum
Solyc01g100330.2 5.0kb downstream 5.0kb downstream 11137 true SL2.50ch01: 90394891-90406027 Solanum lycopersicum
Solyc01g100330.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 90401028-90406027 Solanum lycopersicum
Solyc01g100330.2 10.0kb upstream 10.0kb upstream 16137 true SL2.50ch01: 90384891-90401027 Solanum lycopersicum
Solyc01g100330.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 90384891-90394890 Solanum lycopersicum
Solyc01g100330.2 10.0kb downstream 10.0kb downstream 16137 true SL2.50ch01: 90394891-90411027 Solanum lycopersicum
Solyc01g100330.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 90401028-90411027 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472814 5263 Asterids View MSA
123739727 5271 Pentapetalae View MSA
122792158 5272 Eudicot View MSA
122047848 5273 Angiosperm View MSA
121346040 5274 Embryophyte View MSA
123426715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain