Gene : Solyc01g100080.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR10302:SF6 - SINGLE-STRANDED DNA-BINDING PROTEIN, MITOCHONDRIAL Description:  Single-stranded DNA binding (AHRD V1 ***- Q2HW28_MEDTR); contains Interpro domain(s) IPR000424 Primosome PriB/single-strand DNA-binding
Genomic Order:  3161 Name:  ? Solyc01g100080.2
Secondary Identifier:  ? PAC:36141368
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g100080.2 0.5kb upstream 0.5kb upstream 4337 true SL2.50ch01: 90166450-90170786 Solanum lycopersicum
Solyc01g100080.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 90166450-90166949 Solanum lycopersicum
Solyc01g100080.2 0.5kb downstream 0.5kb downstream 4337 true SL2.50ch01: 90166950-90171286 Solanum lycopersicum
Solyc01g100080.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 90170787-90171286 Solanum lycopersicum
Solyc01g100080.2 1.0kb upstream 1.0kb upstream 4837 true SL2.50ch01: 90165950-90170786 Solanum lycopersicum
Solyc01g100080.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 90165950-90166949 Solanum lycopersicum
Solyc01g100080.2 1.0kb downstream 1.0kb downstream 4837 true SL2.50ch01: 90166950-90171786 Solanum lycopersicum
Solyc01g100080.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 90170787-90171786 Solanum lycopersicum
Solyc01g100080.2 2.0kb upstream 2.0kb upstream 5837 true SL2.50ch01: 90164950-90170786 Solanum lycopersicum
Solyc01g100080.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 90164950-90166949 Solanum lycopersicum
Solyc01g100080.2 2.0kb downstream 2.0kb downstream 5837 true SL2.50ch01: 90166950-90172786 Solanum lycopersicum
Solyc01g100080.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 90170787-90172786 Solanum lycopersicum
Solyc01g100080.2 5.0kb upstream 5.0kb upstream 8837 true SL2.50ch01: 90161950-90170786 Solanum lycopersicum
Solyc01g100080.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 90161950-90166949 Solanum lycopersicum
Solyc01g100080.2 5.0kb downstream 5.0kb downstream 8837 true SL2.50ch01: 90166950-90175786 Solanum lycopersicum
Solyc01g100080.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 90170787-90175786 Solanum lycopersicum
Solyc01g100080.2 10.0kb upstream 10.0kb upstream 13837 true SL2.50ch01: 90156950-90170786 Solanum lycopersicum
Solyc01g100080.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 90156950-90166949 Solanum lycopersicum
Solyc01g100080.2 10.0kb downstream 10.0kb downstream 13837 true SL2.50ch01: 90166950-90180786 Solanum lycopersicum
Solyc01g100080.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 90170787-90180786 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477147 5263 Asterids View MSA
123743137 5271 Pentapetalae View MSA
122790596 5272 Eudicot View MSA
122047632 5273 Angiosperm View MSA
121349645 5274 Embryophyte View MSA
123381385 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain