Gene : Solyc01g067750.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR21089:SF1 - BIFUNCTIONAL 3-DEHYDROQUINATE DEHYDRATASE/SHIKIMATE DEHYDROGENASE, CHLOROPLASTIC Description:  Shikimate dehydrogenase (AHRD V1 ***- B6TSW1_MAIZE); contains Interpro domain(s) IPR001381 Dehydroquinase class I
Genomic Order:  1734 Name:  ? Solyc01g067750.2
Secondary Identifier:  ? PAC:36139196
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum ARO-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-6163 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g067750.2 0.5kb upstream 0.5kb upstream 14889 true SL2.50ch01: 76690973-76705861 Solanum lycopersicum
Solyc01g067750.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 76690973-76691472 Solanum lycopersicum
Solyc01g067750.2 0.5kb downstream 0.5kb downstream 14889 true SL2.50ch01: 76691473-76706361 Solanum lycopersicum
Solyc01g067750.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 76705862-76706361 Solanum lycopersicum
Solyc01g067750.2 1.0kb upstream 1.0kb upstream 15389 true SL2.50ch01: 76690473-76705861 Solanum lycopersicum
Solyc01g067750.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 76690473-76691472 Solanum lycopersicum
Solyc01g067750.2 1.0kb downstream 1.0kb downstream 15389 true SL2.50ch01: 76691473-76706861 Solanum lycopersicum
Solyc01g067750.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 76705862-76706861 Solanum lycopersicum
Solyc01g067750.2 2.0kb upstream 2.0kb upstream 16389 true SL2.50ch01: 76689473-76705861 Solanum lycopersicum
Solyc01g067750.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 76689473-76691472 Solanum lycopersicum
Solyc01g067750.2 2.0kb downstream 2.0kb downstream 16389 true SL2.50ch01: 76691473-76707861 Solanum lycopersicum
Solyc01g067750.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 76705862-76707861 Solanum lycopersicum
Solyc01g067750.2 5.0kb upstream 5.0kb upstream 19389 true SL2.50ch01: 76686473-76705861 Solanum lycopersicum
Solyc01g067750.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 76686473-76691472 Solanum lycopersicum
Solyc01g067750.2 5.0kb downstream 5.0kb downstream 19389 true SL2.50ch01: 76691473-76710861 Solanum lycopersicum
Solyc01g067750.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 76705862-76710861 Solanum lycopersicum
Solyc01g067750.2 10.0kb upstream 10.0kb upstream 24389 true SL2.50ch01: 76681473-76705861 Solanum lycopersicum
Solyc01g067750.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 76681473-76691472 Solanum lycopersicum
Solyc01g067750.2 10.0kb downstream 10.0kb downstream 24389 true SL2.50ch01: 76691473-76715861 Solanum lycopersicum
Solyc01g067750.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 76705862-76715861 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468327 5263 Asterids View MSA
123743031 5271 Pentapetalae View MSA
122788487 5272 Eudicot View MSA
122045026 5273 Angiosperm View MSA
121345779 5274 Embryophyte View MSA
123427556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain