Gene : Solyc01g100450.1 S. lycopersicum ITAG2.4
Defline:  (1 of 420) PF13041 - PPR repeat family (PPR_2) Description:  Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7KJU9_ARALY); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
Genomic Order:  3198 Name:  ? Solyc01g100450.1
Secondary Identifier:  ? PAC:36139890
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g100450.1 0.5kb upstream 0.5kb upstream 2318 true SL2.50ch01: 90474740-90477057 Solanum lycopersicum
Solyc01g100450.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 90474740-90475239 Solanum lycopersicum
Solyc01g100450.1 0.5kb downstream 0.5kb downstream 2318 true SL2.50ch01: 90475240-90477557 Solanum lycopersicum
Solyc01g100450.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 90477058-90477557 Solanum lycopersicum
Solyc01g100450.1 1.0kb upstream 1.0kb upstream 2818 true SL2.50ch01: 90474240-90477057 Solanum lycopersicum
Solyc01g100450.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 90474240-90475239 Solanum lycopersicum
Solyc01g100450.1 1.0kb downstream 1.0kb downstream 2818 true SL2.50ch01: 90475240-90478057 Solanum lycopersicum
Solyc01g100450.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 90477058-90478057 Solanum lycopersicum
Solyc01g100450.1 2.0kb upstream 2.0kb upstream 3818 true SL2.50ch01: 90473240-90477057 Solanum lycopersicum
Solyc01g100450.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 90473240-90475239 Solanum lycopersicum
Solyc01g100450.1 2.0kb downstream 2.0kb downstream 3818 true SL2.50ch01: 90475240-90479057 Solanum lycopersicum
Solyc01g100450.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 90477058-90479057 Solanum lycopersicum
Solyc01g100450.1 5.0kb upstream 5.0kb upstream 6818 true SL2.50ch01: 90470240-90477057 Solanum lycopersicum
Solyc01g100450.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 90470240-90475239 Solanum lycopersicum
Solyc01g100450.1 5.0kb downstream 5.0kb downstream 6818 true SL2.50ch01: 90475240-90482057 Solanum lycopersicum
Solyc01g100450.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 90477058-90482057 Solanum lycopersicum
Solyc01g100450.1 10.0kb upstream 10.0kb upstream 11818 true SL2.50ch01: 90465240-90477057 Solanum lycopersicum
Solyc01g100450.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 90465240-90475239 Solanum lycopersicum
Solyc01g100450.1 10.0kb downstream 10.0kb downstream 11818 true SL2.50ch01: 90475240-90487057 Solanum lycopersicum
Solyc01g100450.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 90477058-90487057 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469808 5263 Asterids View MSA
123738221 5271 Pentapetalae View MSA
122794420 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain