Gene : Solyc01g100430.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) 2.1.1.183 - 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase Description:  Ribosomal RNA small subunit methyltransferase A (AHRD V1 ***- RSMA_CYAP8); contains Interpro domain(s) IPR011530 rRNA adenine dimethylase
Genomic Order:  3196 Name:  ? Solyc01g100430.2
Secondary Identifier:  ? PAC:36140151
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g100430.2 0.5kb upstream 0.5kb upstream 3541 true SL2.50ch01: 90455495-90459035 Solanum lycopersicum
Solyc01g100430.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 90458536-90459035 Solanum lycopersicum
Solyc01g100430.2 0.5kb downstream 0.5kb downstream 3541 true SL2.50ch01: 90454995-90458535 Solanum lycopersicum
Solyc01g100430.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 90454995-90455494 Solanum lycopersicum
Solyc01g100430.2 1.0kb upstream 1.0kb upstream 4041 true SL2.50ch01: 90455495-90459535 Solanum lycopersicum
Solyc01g100430.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 90458536-90459535 Solanum lycopersicum
Solyc01g100430.2 1.0kb downstream 1.0kb downstream 4041 true SL2.50ch01: 90454495-90458535 Solanum lycopersicum
Solyc01g100430.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 90454495-90455494 Solanum lycopersicum
Solyc01g100430.2 2.0kb upstream 2.0kb upstream 5041 true SL2.50ch01: 90455495-90460535 Solanum lycopersicum
Solyc01g100430.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 90458536-90460535 Solanum lycopersicum
Solyc01g100430.2 2.0kb downstream 2.0kb downstream 5041 true SL2.50ch01: 90453495-90458535 Solanum lycopersicum
Solyc01g100430.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 90453495-90455494 Solanum lycopersicum
Solyc01g100430.2 5.0kb upstream 5.0kb upstream 8041 true SL2.50ch01: 90455495-90463535 Solanum lycopersicum
Solyc01g100430.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 90458536-90463535 Solanum lycopersicum
Solyc01g100430.2 5.0kb downstream 5.0kb downstream 8041 true SL2.50ch01: 90450495-90458535 Solanum lycopersicum
Solyc01g100430.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 90450495-90455494 Solanum lycopersicum
Solyc01g100430.2 10.0kb upstream 10.0kb upstream 13041 true SL2.50ch01: 90455495-90468535 Solanum lycopersicum
Solyc01g100430.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 90458536-90468535 Solanum lycopersicum
Solyc01g100430.2 10.0kb downstream 10.0kb downstream 13041 true SL2.50ch01: 90445495-90458535 Solanum lycopersicum
Solyc01g100430.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 90445495-90455494 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475362 5263 Asterids View MSA
123741013 5271 Pentapetalae View MSA
122790361 5272 Eudicot View MSA
122042142 5273 Angiosperm View MSA
121344705 5274 Embryophyte View MSA
123426456 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain