Gene : Solyc01g017990.1 S. lycopersicum ITAG2.4
Defline:  (1 of 16) PTHR23304//PTHR23304:SF128 - SPOT2-RELATED // SUBFAMILY NOT NAMED Description:  Unknown Protein (AHRD V1)
Genomic Order:  986 Name:  ? Solyc01g017990.1
Secondary Identifier:  ? PAC:36138337
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g017990.1 0.5kb upstream 0.5kb upstream 4098 true SL2.50ch01: 26680367-26684464 Solanum lycopersicum
Solyc01g017990.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 26680367-26680866 Solanum lycopersicum
Solyc01g017990.1 0.5kb downstream 0.5kb downstream 4098 true SL2.50ch01: 26680867-26684964 Solanum lycopersicum
Solyc01g017990.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 26684465-26684964 Solanum lycopersicum
Solyc01g017990.1 1.0kb upstream 1.0kb upstream 4598 true SL2.50ch01: 26679867-26684464 Solanum lycopersicum
Solyc01g017990.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 26679867-26680866 Solanum lycopersicum
Solyc01g017990.1 1.0kb downstream 1.0kb downstream 4598 true SL2.50ch01: 26680867-26685464 Solanum lycopersicum
Solyc01g017990.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 26684465-26685464 Solanum lycopersicum
Solyc01g017990.1 2.0kb upstream 2.0kb upstream 5598 true SL2.50ch01: 26678867-26684464 Solanum lycopersicum
Solyc01g017990.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 26678867-26680866 Solanum lycopersicum
Solyc01g017990.1 2.0kb downstream 2.0kb downstream 5598 true SL2.50ch01: 26680867-26686464 Solanum lycopersicum
Solyc01g017990.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 26684465-26686464 Solanum lycopersicum
Solyc01g017990.1 5.0kb upstream 5.0kb upstream 8598 true SL2.50ch01: 26675867-26684464 Solanum lycopersicum
Solyc01g017990.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 26675867-26680866 Solanum lycopersicum
Solyc01g017990.1 5.0kb downstream 5.0kb downstream 8598 true SL2.50ch01: 26680867-26689464 Solanum lycopersicum
Solyc01g017990.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 26684465-26689464 Solanum lycopersicum
Solyc01g017990.1 10.0kb upstream 10.0kb upstream 13598 true SL2.50ch01: 26670867-26684464 Solanum lycopersicum
Solyc01g017990.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 26670867-26680866 Solanum lycopersicum
Solyc01g017990.1 10.0kb downstream 10.0kb downstream 13598 true SL2.50ch01: 26680867-26694464 Solanum lycopersicum
Solyc01g017990.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 26684465-26694464 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121773151 5273 Angiosperm View MSA
121480266 5263 Asterids View MSA
123730172 5271 Pentapetalae View MSA
122763782 5272 Eudicot View MSA
121044840 5274 Embryophyte View MSA
123084965 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain