Gene : Solyc01g017970.1 S. lycopersicum ITAG2.4
Defline:  (1 of 16) PTHR23304//PTHR23304:SF128 - SPOT2-RELATED // SUBFAMILY NOT NAMED Description:  Unknown Protein (AHRD V1)
Genomic Order:  984 Name:  ? Solyc01g017970.1
Secondary Identifier:  ? PAC:36137297
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g017970.1 0.5kb upstream 0.5kb upstream 3077 true SL2.50ch01: 26601361-26604437 Solanum lycopersicum
Solyc01g017970.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 26601361-26601860 Solanum lycopersicum
Solyc01g017970.1 0.5kb downstream 0.5kb downstream 3077 true SL2.50ch01: 26601861-26604937 Solanum lycopersicum
Solyc01g017970.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 26604438-26604937 Solanum lycopersicum
Solyc01g017970.1 1.0kb upstream 1.0kb upstream 3577 true SL2.50ch01: 26600861-26604437 Solanum lycopersicum
Solyc01g017970.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 26600861-26601860 Solanum lycopersicum
Solyc01g017970.1 1.0kb downstream 1.0kb downstream 3577 true SL2.50ch01: 26601861-26605437 Solanum lycopersicum
Solyc01g017970.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 26604438-26605437 Solanum lycopersicum
Solyc01g017970.1 2.0kb upstream 2.0kb upstream 4577 true SL2.50ch01: 26599861-26604437 Solanum lycopersicum
Solyc01g017970.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 26599861-26601860 Solanum lycopersicum
Solyc01g017970.1 2.0kb downstream 2.0kb downstream 4577 true SL2.50ch01: 26601861-26606437 Solanum lycopersicum
Solyc01g017970.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 26604438-26606437 Solanum lycopersicum
Solyc01g017970.1 5.0kb upstream 5.0kb upstream 7577 true SL2.50ch01: 26596861-26604437 Solanum lycopersicum
Solyc01g017970.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 26596861-26601860 Solanum lycopersicum
Solyc01g017970.1 5.0kb downstream 5.0kb downstream 7577 true SL2.50ch01: 26601861-26609437 Solanum lycopersicum
Solyc01g017970.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 26604438-26609437 Solanum lycopersicum
Solyc01g017970.1 10.0kb upstream 10.0kb upstream 12577 true SL2.50ch01: 26591861-26604437 Solanum lycopersicum
Solyc01g017970.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 26591861-26601860 Solanum lycopersicum
Solyc01g017970.1 10.0kb downstream 10.0kb downstream 12577 true SL2.50ch01: 26601861-26614437 Solanum lycopersicum
Solyc01g017970.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 26604438-26614437 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121773151 5273 Angiosperm View MSA
121480266 5263 Asterids View MSA
123730172 5271 Pentapetalae View MSA
122763782 5272 Eudicot View MSA
121044840 5274 Embryophyte View MSA
123084965 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain