Gene : Solyc01g020170.1 S. lycopersicum ITAG2.4
Defline:  (1 of 11) PTHR11514//PTHR11514:SF57 - MYC // SUBFAMILY NOT NAMED Description:  Basic helix-loop-helix family protein (AHRD V1 ***- D7KF18_ARALY); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Genomic Order:  1005 Name:  ? Solyc01g020170.1
Secondary Identifier:  ? PAC:36138339
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g020170.1 0.5kb upstream 0.5kb upstream 2456 true SL2.50ch01: 27847772-27850227 Solanum lycopersicum
Solyc01g020170.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 27847772-27848271 Solanum lycopersicum
Solyc01g020170.1 0.5kb downstream 0.5kb downstream 2456 true SL2.50ch01: 27848272-27850727 Solanum lycopersicum
Solyc01g020170.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 27850228-27850727 Solanum lycopersicum
Solyc01g020170.1 1.0kb upstream 1.0kb upstream 2956 true SL2.50ch01: 27847272-27850227 Solanum lycopersicum
Solyc01g020170.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 27847272-27848271 Solanum lycopersicum
Solyc01g020170.1 1.0kb downstream 1.0kb downstream 2956 true SL2.50ch01: 27848272-27851227 Solanum lycopersicum
Solyc01g020170.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 27850228-27851227 Solanum lycopersicum
Solyc01g020170.1 2.0kb upstream 2.0kb upstream 3956 true SL2.50ch01: 27846272-27850227 Solanum lycopersicum
Solyc01g020170.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 27846272-27848271 Solanum lycopersicum
Solyc01g020170.1 2.0kb downstream 2.0kb downstream 3956 true SL2.50ch01: 27848272-27852227 Solanum lycopersicum
Solyc01g020170.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 27850228-27852227 Solanum lycopersicum
Solyc01g020170.1 5.0kb upstream 5.0kb upstream 6956 true SL2.50ch01: 27843272-27850227 Solanum lycopersicum
Solyc01g020170.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 27843272-27848271 Solanum lycopersicum
Solyc01g020170.1 5.0kb downstream 5.0kb downstream 6956 true SL2.50ch01: 27848272-27855227 Solanum lycopersicum
Solyc01g020170.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 27850228-27855227 Solanum lycopersicum
Solyc01g020170.1 10.0kb upstream 10.0kb upstream 11956 true SL2.50ch01: 27838272-27850227 Solanum lycopersicum
Solyc01g020170.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 27838272-27848271 Solanum lycopersicum
Solyc01g020170.1 10.0kb downstream 10.0kb downstream 11956 true SL2.50ch01: 27848272-27860227 Solanum lycopersicum
Solyc01g020170.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 27850228-27860227 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466386 5263 Asterids View MSA
123745175 5271 Pentapetalae View MSA
122785778 5272 Eudicot View MSA
122050388 5273 Angiosperm View MSA
121350598 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain