Gene : Solyc01g014230.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR23315//PTHR23315:SF117 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // SUBFAMILY NOT NAMED Description:  U-box domain-containing protein 4 (AHRD V1 **-- PUB4_ARATH); contains Interpro domain(s) IPR011989 Armadillo-like helical
Genomic Order:  716 Name:  ? Solyc01g014230.2
Secondary Identifier:  ? PAC:36137168
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-7511 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g014230.2 0.5kb upstream 0.5kb upstream 3801 true SL2.50ch01: 11880408-11884208 Solanum lycopersicum
Solyc01g014230.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 11883709-11884208 Solanum lycopersicum
Solyc01g014230.2 0.5kb downstream 0.5kb downstream 3801 true SL2.50ch01: 11879908-11883708 Solanum lycopersicum
Solyc01g014230.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 11879908-11880407 Solanum lycopersicum
Solyc01g014230.2 1.0kb upstream 1.0kb upstream 4301 true SL2.50ch01: 11880408-11884708 Solanum lycopersicum
Solyc01g014230.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 11883709-11884708 Solanum lycopersicum
Solyc01g014230.2 1.0kb downstream 1.0kb downstream 4301 true SL2.50ch01: 11879408-11883708 Solanum lycopersicum
Solyc01g014230.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 11879408-11880407 Solanum lycopersicum
Solyc01g014230.2 2.0kb upstream 2.0kb upstream 5301 true SL2.50ch01: 11880408-11885708 Solanum lycopersicum
Solyc01g014230.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 11883709-11885708 Solanum lycopersicum
Solyc01g014230.2 2.0kb downstream 2.0kb downstream 5301 true SL2.50ch01: 11878408-11883708 Solanum lycopersicum
Solyc01g014230.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 11878408-11880407 Solanum lycopersicum
Solyc01g014230.2 5.0kb upstream 5.0kb upstream 8301 true SL2.50ch01: 11880408-11888708 Solanum lycopersicum
Solyc01g014230.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 11883709-11888708 Solanum lycopersicum
Solyc01g014230.2 5.0kb downstream 5.0kb downstream 8301 true SL2.50ch01: 11875408-11883708 Solanum lycopersicum
Solyc01g014230.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 11875408-11880407 Solanum lycopersicum
Solyc01g014230.2 10.0kb upstream 10.0kb upstream 13301 true SL2.50ch01: 11880408-11893708 Solanum lycopersicum
Solyc01g014230.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 11883709-11893708 Solanum lycopersicum
Solyc01g014230.2 10.0kb downstream 10.0kb downstream 13301 true SL2.50ch01: 11870408-11883708 Solanum lycopersicum
Solyc01g014230.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 11870408-11880407 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477382 5263 Asterids View MSA
123748124 5271 Pentapetalae View MSA
122789337 5272 Eudicot View MSA
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain