Gene : Solyc01g056450.1 S. lycopersicum ITAG2.4
Defline:  (1 of 10) 6.3.1.2 - Glutamate--ammonia ligase / Glutamine synthetase Description:  Glutamine synthetase I (AHRD V1 ***- Q9SC91_MEDTR); contains Interpro domain(s) IPR008146 Glutamine synthetase, catalytic region
Genomic Order:  1220 Name:  ? Solyc01g056450.1
Secondary Identifier:  ? PAC:36141276
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum GLNSYN-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-3282 Solanum lycopersicum pathologic  
Slycopersicum PWY-381 Solanum lycopersicum pathologic  
Slycopersicum PWY-6549 Solanum lycopersicum pathologic  
Slycopersicum PWY-6963 Solanum lycopersicum pathologic  
Slycopersicum PWY-6964 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g056450.1 0.5kb upstream 0.5kb upstream 3452 true SL2.50ch01: 54173332-54176783 Solanum lycopersicum
Solyc01g056450.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 54173332-54173831 Solanum lycopersicum
Solyc01g056450.1 0.5kb downstream 0.5kb downstream 3452 true SL2.50ch01: 54173832-54177283 Solanum lycopersicum
Solyc01g056450.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 54176784-54177283 Solanum lycopersicum
Solyc01g056450.1 1.0kb upstream 1.0kb upstream 3952 true SL2.50ch01: 54172832-54176783 Solanum lycopersicum
Solyc01g056450.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 54172832-54173831 Solanum lycopersicum
Solyc01g056450.1 1.0kb downstream 1.0kb downstream 3952 true SL2.50ch01: 54173832-54177783 Solanum lycopersicum
Solyc01g056450.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 54176784-54177783 Solanum lycopersicum
Solyc01g056450.1 2.0kb upstream 2.0kb upstream 4952 true SL2.50ch01: 54171832-54176783 Solanum lycopersicum
Solyc01g056450.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 54171832-54173831 Solanum lycopersicum
Solyc01g056450.1 2.0kb downstream 2.0kb downstream 4952 true SL2.50ch01: 54173832-54178783 Solanum lycopersicum
Solyc01g056450.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 54176784-54178783 Solanum lycopersicum
Solyc01g056450.1 5.0kb upstream 5.0kb upstream 7952 true SL2.50ch01: 54168832-54176783 Solanum lycopersicum
Solyc01g056450.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 54168832-54173831 Solanum lycopersicum
Solyc01g056450.1 5.0kb downstream 5.0kb downstream 7952 true SL2.50ch01: 54173832-54181783 Solanum lycopersicum
Solyc01g056450.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 54176784-54181783 Solanum lycopersicum
Solyc01g056450.1 10.0kb upstream 10.0kb upstream 12952 true SL2.50ch01: 54163832-54176783 Solanum lycopersicum
Solyc01g056450.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 54163832-54173831 Solanum lycopersicum
Solyc01g056450.1 10.0kb downstream 10.0kb downstream 12952 true SL2.50ch01: 54173832-54186783 Solanum lycopersicum
Solyc01g056450.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 54176784-54186783 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026914 5273 Angiosperm View MSA
121388567 5263 Asterids View MSA
123752006 5271 Pentapetalae View MSA
122774303 5272 Eudicot View MSA
121296655 5274 Embryophyte View MSA
123428524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain