Gene : Solyc01g057570.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K10768 - alkylated DNA repair protein alkB homolog 6 (ALKBH6) Description:  Alkylated DNA repair protein alkB (AHRD V1 **-- D0NI62_PHYIN)
Genomic Order:  1325 Name:  ? Solyc01g057570.2
Secondary Identifier:  ? PAC:36141137
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-6829 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g057570.2 0.5kb upstream 0.5kb upstream 7915 true SL2.50ch01: 61880462-61888376 Solanum lycopersicum
Solyc01g057570.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 61880462-61880961 Solanum lycopersicum
Solyc01g057570.2 0.5kb downstream 0.5kb downstream 7915 true SL2.50ch01: 61880962-61888876 Solanum lycopersicum
Solyc01g057570.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 61888377-61888876 Solanum lycopersicum
Solyc01g057570.2 1.0kb upstream 1.0kb upstream 8415 true SL2.50ch01: 61879962-61888376 Solanum lycopersicum
Solyc01g057570.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 61879962-61880961 Solanum lycopersicum
Solyc01g057570.2 1.0kb downstream 1.0kb downstream 8415 true SL2.50ch01: 61880962-61889376 Solanum lycopersicum
Solyc01g057570.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 61888377-61889376 Solanum lycopersicum
Solyc01g057570.2 2.0kb upstream 2.0kb upstream 9415 true SL2.50ch01: 61878962-61888376 Solanum lycopersicum
Solyc01g057570.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 61878962-61880961 Solanum lycopersicum
Solyc01g057570.2 2.0kb downstream 2.0kb downstream 9415 true SL2.50ch01: 61880962-61890376 Solanum lycopersicum
Solyc01g057570.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 61888377-61890376 Solanum lycopersicum
Solyc01g057570.2 5.0kb upstream 5.0kb upstream 12415 true SL2.50ch01: 61875962-61888376 Solanum lycopersicum
Solyc01g057570.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 61875962-61880961 Solanum lycopersicum
Solyc01g057570.2 5.0kb downstream 5.0kb downstream 12415 true SL2.50ch01: 61880962-61893376 Solanum lycopersicum
Solyc01g057570.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 61888377-61893376 Solanum lycopersicum
Solyc01g057570.2 10.0kb upstream 10.0kb upstream 17415 true SL2.50ch01: 61870962-61888376 Solanum lycopersicum
Solyc01g057570.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 61870962-61880961 Solanum lycopersicum
Solyc01g057570.2 10.0kb downstream 10.0kb downstream 17415 true SL2.50ch01: 61880962-61898376 Solanum lycopersicum
Solyc01g057570.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 61888377-61898376 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475103 5263 Asterids View MSA
123740890 5271 Pentapetalae View MSA
122791933 5272 Eudicot View MSA
122044180 5273 Angiosperm View MSA
121345583 5274 Embryophyte View MSA
123428839 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain