Gene : Solyc01g099130.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR20932//PTHR20932:SF9 - LOC443603 PROTEIN-RELATED // SUBFAMILY NOT NAMED Description:  LysM domain containing protein (AHRD V1 ***- B6TTS5_MAIZE); contains Interpro domain(s) IPR018392 Peptidoglycan-binding lysin domain
Genomic Order:  3067 Name:  ? Solyc01g099130.2
Secondary Identifier:  ? PAC:36137416
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g099130.2 0.5kb upstream 0.5kb upstream 3363 true SL2.50ch01: 89445815-89449177 Solanum lycopersicum
Solyc01g099130.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 89445815-89446314 Solanum lycopersicum
Solyc01g099130.2 0.5kb downstream 0.5kb downstream 3363 true SL2.50ch01: 89446315-89449677 Solanum lycopersicum
Solyc01g099130.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 89449178-89449677 Solanum lycopersicum
Solyc01g099130.2 1.0kb upstream 1.0kb upstream 3863 true SL2.50ch01: 89445315-89449177 Solanum lycopersicum
Solyc01g099130.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 89445315-89446314 Solanum lycopersicum
Solyc01g099130.2 1.0kb downstream 1.0kb downstream 3863 true SL2.50ch01: 89446315-89450177 Solanum lycopersicum
Solyc01g099130.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 89449178-89450177 Solanum lycopersicum
Solyc01g099130.2 2.0kb upstream 2.0kb upstream 4863 true SL2.50ch01: 89444315-89449177 Solanum lycopersicum
Solyc01g099130.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 89444315-89446314 Solanum lycopersicum
Solyc01g099130.2 2.0kb downstream 2.0kb downstream 4863 true SL2.50ch01: 89446315-89451177 Solanum lycopersicum
Solyc01g099130.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 89449178-89451177 Solanum lycopersicum
Solyc01g099130.2 5.0kb upstream 5.0kb upstream 7863 true SL2.50ch01: 89441315-89449177 Solanum lycopersicum
Solyc01g099130.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 89441315-89446314 Solanum lycopersicum
Solyc01g099130.2 5.0kb downstream 5.0kb downstream 7863 true SL2.50ch01: 89446315-89454177 Solanum lycopersicum
Solyc01g099130.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 89449178-89454177 Solanum lycopersicum
Solyc01g099130.2 10.0kb upstream 10.0kb upstream 12863 true SL2.50ch01: 89436315-89449177 Solanum lycopersicum
Solyc01g099130.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 89436315-89446314 Solanum lycopersicum
Solyc01g099130.2 10.0kb downstream 10.0kb downstream 12863 true SL2.50ch01: 89446315-89459177 Solanum lycopersicum
Solyc01g099130.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 89449178-89459177 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472946 5263 Asterids View MSA
123748908 5271 Pentapetalae View MSA
122796552 5272 Eudicot View MSA
122043653 5273 Angiosperm View MSA
121310161 5274 Embryophyte View MSA
123425497 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain