Gene : Solyc01g008460.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR23426//PTHR23426:SF31 - FERREDOXIN/ADRENODOXIN // SUBFAMILY NOT NAMED Description:  2Fe-2S ferredoxin (AHRD V1 **-- B6U5I8_MAIZE); contains Interpro domain(s) IPR001041 Ferredoxin
Genomic Order:  347 Name:  ? Solyc01g008460.2
Secondary Identifier:  ? PAC:36138127
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY0-1507 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g008460.2 0.5kb upstream 0.5kb upstream 5537 true SL2.50ch01: 2542272-2547808 Solanum lycopersicum
Solyc01g008460.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 2547309-2547808 Solanum lycopersicum
Solyc01g008460.2 0.5kb downstream 0.5kb downstream 5537 true SL2.50ch01: 2541772-2547308 Solanum lycopersicum
Solyc01g008460.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 2541772-2542271 Solanum lycopersicum
Solyc01g008460.2 1.0kb upstream 1.0kb upstream 6037 true SL2.50ch01: 2542272-2548308 Solanum lycopersicum
Solyc01g008460.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 2547309-2548308 Solanum lycopersicum
Solyc01g008460.2 1.0kb downstream 1.0kb downstream 6037 true SL2.50ch01: 2541272-2547308 Solanum lycopersicum
Solyc01g008460.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 2541272-2542271 Solanum lycopersicum
Solyc01g008460.2 2.0kb upstream 2.0kb upstream 7037 true SL2.50ch01: 2542272-2549308 Solanum lycopersicum
Solyc01g008460.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 2547309-2549308 Solanum lycopersicum
Solyc01g008460.2 2.0kb downstream 2.0kb downstream 7037 true SL2.50ch01: 2540272-2547308 Solanum lycopersicum
Solyc01g008460.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 2540272-2542271 Solanum lycopersicum
Solyc01g008460.2 5.0kb upstream 5.0kb upstream 10037 true SL2.50ch01: 2542272-2552308 Solanum lycopersicum
Solyc01g008460.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 2547309-2552308 Solanum lycopersicum
Solyc01g008460.2 5.0kb downstream 5.0kb downstream 10037 true SL2.50ch01: 2537272-2547308 Solanum lycopersicum
Solyc01g008460.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 2537272-2542271 Solanum lycopersicum
Solyc01g008460.2 10.0kb upstream 10.0kb upstream 15037 true SL2.50ch01: 2542272-2557308 Solanum lycopersicum
Solyc01g008460.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 2547309-2557308 Solanum lycopersicum
Solyc01g008460.2 10.0kb downstream 10.0kb downstream 15037 true SL2.50ch01: 2532272-2547308 Solanum lycopersicum
Solyc01g008460.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 2532272-2542271 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121386090 5263 Asterids View MSA
123747158 5271 Pentapetalae View MSA
122792160 5272 Eudicot View MSA
122043528 5273 Angiosperm View MSA
121349592 5274 Embryophyte View MSA
123425610 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain