Gene : Solyc01g008310.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K01890 - phenylalanyl-tRNA synthetase beta chain (FARSB, pheT) Description:  Phenylalanyl-tRNA synthetase beta chain (AHRD V1 **** B6SHI1_MAIZE); contains Interpro domain(s) IPR004531 Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic
Genomic Order:  332 Name:  ? Solyc01g008310.2
Secondary Identifier:  ? PAC:36139256
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum TRNA-CHARGING-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g008310.2 0.5kb upstream 0.5kb upstream 13830 true SL2.50ch01: 2409381-2423210 Solanum lycopersicum
Solyc01g008310.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 2422711-2423210 Solanum lycopersicum
Solyc01g008310.2 0.5kb downstream 0.5kb downstream 13830 true SL2.50ch01: 2408881-2422710 Solanum lycopersicum
Solyc01g008310.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 2408881-2409380 Solanum lycopersicum
Solyc01g008310.2 1.0kb upstream 1.0kb upstream 14330 true SL2.50ch01: 2409381-2423710 Solanum lycopersicum
Solyc01g008310.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 2422711-2423710 Solanum lycopersicum
Solyc01g008310.2 1.0kb downstream 1.0kb downstream 14330 true SL2.50ch01: 2408381-2422710 Solanum lycopersicum
Solyc01g008310.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 2408381-2409380 Solanum lycopersicum
Solyc01g008310.2 2.0kb upstream 2.0kb upstream 15330 true SL2.50ch01: 2409381-2424710 Solanum lycopersicum
Solyc01g008310.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 2422711-2424710 Solanum lycopersicum
Solyc01g008310.2 2.0kb downstream 2.0kb downstream 15330 true SL2.50ch01: 2407381-2422710 Solanum lycopersicum
Solyc01g008310.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 2407381-2409380 Solanum lycopersicum
Solyc01g008310.2 5.0kb upstream 5.0kb upstream 18330 true SL2.50ch01: 2409381-2427710 Solanum lycopersicum
Solyc01g008310.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 2422711-2427710 Solanum lycopersicum
Solyc01g008310.2 5.0kb downstream 5.0kb downstream 18330 true SL2.50ch01: 2404381-2422710 Solanum lycopersicum
Solyc01g008310.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 2404381-2409380 Solanum lycopersicum
Solyc01g008310.2 10.0kb upstream 10.0kb upstream 23330 true SL2.50ch01: 2409381-2432710 Solanum lycopersicum
Solyc01g008310.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 2422711-2432710 Solanum lycopersicum
Solyc01g008310.2 10.0kb downstream 10.0kb downstream 23330 true SL2.50ch01: 2399381-2422710 Solanum lycopersicum
Solyc01g008310.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 2399381-2409380 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471299 5263 Asterids View MSA
123738962 5271 Pentapetalae View MSA
122792851 5272 Eudicot View MSA
122042437 5273 Angiosperm View MSA
121345306 5274 Embryophyte View MSA
123425015 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain