Gene : Solyc01g010580.2 S. lycopersicum ITAG2.4
Defline:  (1 of 4) K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Description:  Ribosomal protein (AHRD V1 ***- B3TM27_ELAGV); contains Interpro domain(s) IPR002942 RNA-binding S4 IPR018079 Ribosomal protein S4, conserved site IPR001912 Ribosomal protein S4
Genomic Order:  557 Name:  ? Solyc01g010580.2
Secondary Identifier:  ? PAC:36141028
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g010580.2 0.5kb upstream 0.5kb upstream 3425 true SL2.50ch01: 5589970-5593394 Solanum lycopersicum
Solyc01g010580.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 5589970-5590469 Solanum lycopersicum
Solyc01g010580.2 0.5kb downstream 0.5kb downstream 3425 true SL2.50ch01: 5590470-5593894 Solanum lycopersicum
Solyc01g010580.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 5593395-5593894 Solanum lycopersicum
Solyc01g010580.2 1.0kb upstream 1.0kb upstream 3925 true SL2.50ch01: 5589470-5593394 Solanum lycopersicum
Solyc01g010580.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 5589470-5590469 Solanum lycopersicum
Solyc01g010580.2 1.0kb downstream 1.0kb downstream 3925 true SL2.50ch01: 5590470-5594394 Solanum lycopersicum
Solyc01g010580.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 5593395-5594394 Solanum lycopersicum
Solyc01g010580.2 2.0kb upstream 2.0kb upstream 4925 true SL2.50ch01: 5588470-5593394 Solanum lycopersicum
Solyc01g010580.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 5588470-5590469 Solanum lycopersicum
Solyc01g010580.2 2.0kb downstream 2.0kb downstream 4925 true SL2.50ch01: 5590470-5595394 Solanum lycopersicum
Solyc01g010580.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 5593395-5595394 Solanum lycopersicum
Solyc01g010580.2 5.0kb upstream 5.0kb upstream 7925 true SL2.50ch01: 5585470-5593394 Solanum lycopersicum
Solyc01g010580.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 5585470-5590469 Solanum lycopersicum
Solyc01g010580.2 5.0kb downstream 5.0kb downstream 7925 true SL2.50ch01: 5590470-5598394 Solanum lycopersicum
Solyc01g010580.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 5593395-5598394 Solanum lycopersicum
Solyc01g010580.2 10.0kb upstream 10.0kb upstream 12925 true SL2.50ch01: 5580470-5593394 Solanum lycopersicum
Solyc01g010580.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 5580470-5590469 Solanum lycopersicum
Solyc01g010580.2 10.0kb downstream 10.0kb downstream 12925 true SL2.50ch01: 5590470-5603394 Solanum lycopersicum
Solyc01g010580.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 5593395-5603394 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121365209 5263 Asterids Singleton cluster - no MSA
123748066 5271 Pentapetalae View MSA
122790013 5272 Eudicot View MSA
122042868 5273 Angiosperm View MSA
121345250 5274 Embryophyte View MSA
123426931 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain