Gene : Solyc01g009870.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K18696 - glycerophosphodiester phosphodiesterase (GDE1) Description:  Glycerophosphodiester phosphodiesterase GDE1 (AHRD V1 ***- B2WNF5_PYRTR); contains Interpro domain(s) IPR004129 Glycerophosphoryl diester phosphodiesterase
Genomic Order:  487 Name:  ? Solyc01g009870.2
Secondary Identifier:  ? PAC:36138835
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-7409 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g009870.2 0.5kb upstream 0.5kb upstream 4733 true SL2.50ch01: 4404419-4409151 Solanum lycopersicum
Solyc01g009870.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 4408652-4409151 Solanum lycopersicum
Solyc01g009870.2 0.5kb downstream 0.5kb downstream 4733 true SL2.50ch01: 4403919-4408651 Solanum lycopersicum
Solyc01g009870.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 4403919-4404418 Solanum lycopersicum
Solyc01g009870.2 1.0kb upstream 1.0kb upstream 5233 true SL2.50ch01: 4404419-4409651 Solanum lycopersicum
Solyc01g009870.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 4408652-4409651 Solanum lycopersicum
Solyc01g009870.2 1.0kb downstream 1.0kb downstream 5233 true SL2.50ch01: 4403419-4408651 Solanum lycopersicum
Solyc01g009870.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 4403419-4404418 Solanum lycopersicum
Solyc01g009870.2 2.0kb upstream 2.0kb upstream 6233 true SL2.50ch01: 4404419-4410651 Solanum lycopersicum
Solyc01g009870.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 4408652-4410651 Solanum lycopersicum
Solyc01g009870.2 2.0kb downstream 2.0kb downstream 6233 true SL2.50ch01: 4402419-4408651 Solanum lycopersicum
Solyc01g009870.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 4402419-4404418 Solanum lycopersicum
Solyc01g009870.2 5.0kb upstream 5.0kb upstream 9233 true SL2.50ch01: 4404419-4413651 Solanum lycopersicum
Solyc01g009870.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 4408652-4413651 Solanum lycopersicum
Solyc01g009870.2 5.0kb downstream 5.0kb downstream 9233 true SL2.50ch01: 4399419-4408651 Solanum lycopersicum
Solyc01g009870.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 4399419-4404418 Solanum lycopersicum
Solyc01g009870.2 10.0kb upstream 10.0kb upstream 14233 true SL2.50ch01: 4404419-4418651 Solanum lycopersicum
Solyc01g009870.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 4408652-4418651 Solanum lycopersicum
Solyc01g009870.2 10.0kb downstream 10.0kb downstream 14233 true SL2.50ch01: 4394419-4408651 Solanum lycopersicum
Solyc01g009870.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 4394419-4404418 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121388783 5263 Asterids View MSA
123747785 5271 Pentapetalae View MSA
122794114 5272 Eudicot View MSA
122041847 5273 Angiosperm View MSA
123429151 5275 Viridiplantae View MSA
121351088 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain