Gene : Solyc01g009680.2 S. lycopersicum ITAG2.4
Defline:  (1 of 7) K00454 - lipoxygenase (LOX2S) Description:  Lipoxygenase (AHRD V1 ***- C0KKU8_SOLLC); contains Interpro domain(s) IPR001246 Lipoxygenase, plant
Genomic Order:  468 Name:  ? Solyc01g009680.2
Secondary Identifier:  ? PAC:36141220
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5410 Solanum lycopersicum pathologic  
Slycopersicum PWY-735 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g009680.2 0.5kb upstream 0.5kb upstream 4170 true SL2.50ch01: 3967294-3971463 Solanum lycopersicum
Solyc01g009680.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 3967294-3967793 Solanum lycopersicum
Solyc01g009680.2 0.5kb downstream 0.5kb downstream 4170 true SL2.50ch01: 3967794-3971963 Solanum lycopersicum
Solyc01g009680.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 3971464-3971963 Solanum lycopersicum
Solyc01g009680.2 1.0kb upstream 1.0kb upstream 4670 true SL2.50ch01: 3966794-3971463 Solanum lycopersicum
Solyc01g009680.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 3966794-3967793 Solanum lycopersicum
Solyc01g009680.2 1.0kb downstream 1.0kb downstream 4670 true SL2.50ch01: 3967794-3972463 Solanum lycopersicum
Solyc01g009680.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 3971464-3972463 Solanum lycopersicum
Solyc01g009680.2 2.0kb upstream 2.0kb upstream 5670 true SL2.50ch01: 3965794-3971463 Solanum lycopersicum
Solyc01g009680.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 3965794-3967793 Solanum lycopersicum
Solyc01g009680.2 2.0kb downstream 2.0kb downstream 5670 true SL2.50ch01: 3967794-3973463 Solanum lycopersicum
Solyc01g009680.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 3971464-3973463 Solanum lycopersicum
Solyc01g009680.2 5.0kb upstream 5.0kb upstream 8670 true SL2.50ch01: 3962794-3971463 Solanum lycopersicum
Solyc01g009680.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 3962794-3967793 Solanum lycopersicum
Solyc01g009680.2 5.0kb downstream 5.0kb downstream 8670 true SL2.50ch01: 3967794-3976463 Solanum lycopersicum
Solyc01g009680.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 3971464-3976463 Solanum lycopersicum
Solyc01g009680.2 10.0kb upstream 10.0kb upstream 13670 true SL2.50ch01: 3957794-3971463 Solanum lycopersicum
Solyc01g009680.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 3957794-3967793 Solanum lycopersicum
Solyc01g009680.2 10.0kb downstream 10.0kb downstream 13670 true SL2.50ch01: 3967794-3981463 Solanum lycopersicum
Solyc01g009680.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 3971464-3981463 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121389171 5263 Asterids View MSA
123750087 5271 Pentapetalae View MSA
122788853 5272 Eudicot View MSA
122051623 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain