Gene : Solyc01g005240.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K00928 - aspartate kinase (lysC) Description:  Aspartokinase (AHRD V1 ***- B9RGY9_RICCO); contains Interpro domain(s) IPR001341 Aspartate kinase region
Genomic Order:  25 Name:  ? Solyc01g005240.2
Secondary Identifier:  ? PAC:36141144
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum HOMOSERSYN-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-3001 Solanum lycopersicum pathologic  
Slycopersicum PWY-5097 Solanum lycopersicum pathologic  
Slycopersicum PWY-724 Solanum lycopersicum pathologic  
Slycopersicum THRESYN-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g005240.2 0.5kb upstream 0.5kb upstream 6472 true SL2.50ch01: 185214-191685 Solanum lycopersicum
Solyc01g005240.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 185214-185713 Solanum lycopersicum
Solyc01g005240.2 0.5kb downstream 0.5kb downstream 6472 true SL2.50ch01: 185714-192185 Solanum lycopersicum
Solyc01g005240.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 191686-192185 Solanum lycopersicum
Solyc01g005240.2 1.0kb upstream 1.0kb upstream 6972 true SL2.50ch01: 184714-191685 Solanum lycopersicum
Solyc01g005240.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 184714-185713 Solanum lycopersicum
Solyc01g005240.2 1.0kb downstream 1.0kb downstream 6972 true SL2.50ch01: 185714-192685 Solanum lycopersicum
Solyc01g005240.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 191686-192685 Solanum lycopersicum
Solyc01g005240.2 2.0kb upstream 2.0kb upstream 7972 true SL2.50ch01: 183714-191685 Solanum lycopersicum
Solyc01g005240.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 183714-185713 Solanum lycopersicum
Solyc01g005240.2 2.0kb downstream 2.0kb downstream 7972 true SL2.50ch01: 185714-193685 Solanum lycopersicum
Solyc01g005240.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 191686-193685 Solanum lycopersicum
Solyc01g005240.2 5.0kb upstream 5.0kb upstream 10972 true SL2.50ch01: 180714-191685 Solanum lycopersicum
Solyc01g005240.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 180714-185713 Solanum lycopersicum
Solyc01g005240.2 5.0kb downstream 5.0kb downstream 10972 true SL2.50ch01: 185714-196685 Solanum lycopersicum
Solyc01g005240.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 191686-196685 Solanum lycopersicum
Solyc01g005240.2 10.0kb upstream 10.0kb upstream 15972 true SL2.50ch01: 175714-191685 Solanum lycopersicum
Solyc01g005240.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 175714-185713 Solanum lycopersicum
Solyc01g005240.2 10.0kb downstream 10.0kb downstream 15972 true SL2.50ch01: 185714-201685 Solanum lycopersicum
Solyc01g005240.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 191686-201685 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471657 5263 Asterids View MSA
123738935 5271 Pentapetalae View MSA
122796231 5272 Eudicot View MSA
122050797 5273 Angiosperm View MSA
121346150 5274 Embryophyte View MSA
123424787 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain