Gene : Solyc01g098320.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR10535:SF2 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 5A-RELATED Description:  DNA-directed RNA polymerase subunit H (AHRD V1 *-*- RPOH_METJA); contains Interpro domain(s) IPR014381 DNA-directed RNA polymerase, RPB5 subunit
Genomic Order:  2986 Name:  ? Solyc01g098320.2
Secondary Identifier:  ? PAC:36139459
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g098320.2 0.5kb upstream 0.5kb upstream 4423 true SL2.50ch01: 88879695-88884117 Solanum lycopersicum
Solyc01g098320.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 88879695-88880194 Solanum lycopersicum
Solyc01g098320.2 0.5kb downstream 0.5kb downstream 4423 true SL2.50ch01: 88880195-88884617 Solanum lycopersicum
Solyc01g098320.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 88884118-88884617 Solanum lycopersicum
Solyc01g098320.2 1.0kb upstream 1.0kb upstream 4923 true SL2.50ch01: 88879195-88884117 Solanum lycopersicum
Solyc01g098320.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 88879195-88880194 Solanum lycopersicum
Solyc01g098320.2 1.0kb downstream 1.0kb downstream 4923 true SL2.50ch01: 88880195-88885117 Solanum lycopersicum
Solyc01g098320.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 88884118-88885117 Solanum lycopersicum
Solyc01g098320.2 2.0kb upstream 2.0kb upstream 5923 true SL2.50ch01: 88878195-88884117 Solanum lycopersicum
Solyc01g098320.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 88878195-88880194 Solanum lycopersicum
Solyc01g098320.2 2.0kb downstream 2.0kb downstream 5923 true SL2.50ch01: 88880195-88886117 Solanum lycopersicum
Solyc01g098320.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 88884118-88886117 Solanum lycopersicum
Solyc01g098320.2 5.0kb upstream 5.0kb upstream 8923 true SL2.50ch01: 88875195-88884117 Solanum lycopersicum
Solyc01g098320.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 88875195-88880194 Solanum lycopersicum
Solyc01g098320.2 5.0kb downstream 5.0kb downstream 8923 true SL2.50ch01: 88880195-88889117 Solanum lycopersicum
Solyc01g098320.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 88884118-88889117 Solanum lycopersicum
Solyc01g098320.2 10.0kb upstream 10.0kb upstream 13923 true SL2.50ch01: 88870195-88884117 Solanum lycopersicum
Solyc01g098320.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 88870195-88880194 Solanum lycopersicum
Solyc01g098320.2 10.0kb downstream 10.0kb downstream 13923 true SL2.50ch01: 88880195-88894117 Solanum lycopersicum
Solyc01g098320.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 88884118-88894117 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478361 5263 Asterids View MSA
123741650 5271 Pentapetalae View MSA
122792617 5272 Eudicot View MSA
122051300 5273 Angiosperm View MSA
121352511 5274 Embryophyte View MSA
123382830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain