Gene : Solyc01g005120.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR31062:SF44 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 27-RELATED Description:  Xyloglucan endotransglucosylase/hydrolase 13 (AHRD V1 **** C0IRH2_ACTDE); contains Interpro domain(s) IPR016455 Xyloglucan endotransglucosylase/hydrolase
Genomic Order:  13 Name:  ? Solyc01g005120.2
Secondary Identifier:  ? PAC:36139115
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g005120.2 0.5kb upstream 0.5kb upstream 3724 true SL2.50ch01: 104191-107914 Solanum lycopersicum
Solyc01g005120.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 107415-107914 Solanum lycopersicum
Solyc01g005120.2 0.5kb downstream 0.5kb downstream 3724 true SL2.50ch01: 103691-107414 Solanum lycopersicum
Solyc01g005120.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 103691-104190 Solanum lycopersicum
Solyc01g005120.2 1.0kb upstream 1.0kb upstream 4224 true SL2.50ch01: 104191-108414 Solanum lycopersicum
Solyc01g005120.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 107415-108414 Solanum lycopersicum
Solyc01g005120.2 1.0kb downstream 1.0kb downstream 4224 true SL2.50ch01: 103191-107414 Solanum lycopersicum
Solyc01g005120.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 103191-104190 Solanum lycopersicum
Solyc01g005120.2 2.0kb upstream 2.0kb upstream 5224 true SL2.50ch01: 104191-109414 Solanum lycopersicum
Solyc01g005120.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 107415-109414 Solanum lycopersicum
Solyc01g005120.2 2.0kb downstream 2.0kb downstream 5224 true SL2.50ch01: 102191-107414 Solanum lycopersicum
Solyc01g005120.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 102191-104190 Solanum lycopersicum
Solyc01g005120.2 5.0kb upstream 5.0kb upstream 8224 true SL2.50ch01: 104191-112414 Solanum lycopersicum
Solyc01g005120.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 107415-112414 Solanum lycopersicum
Solyc01g005120.2 5.0kb downstream 5.0kb downstream 8224 true SL2.50ch01: 99191-107414 Solanum lycopersicum
Solyc01g005120.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 99191-104190 Solanum lycopersicum
Solyc01g005120.2 10.0kb upstream 10.0kb upstream 13224 true SL2.50ch01: 104191-117414 Solanum lycopersicum
Solyc01g005120.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 107415-117414 Solanum lycopersicum
Solyc01g005120.2 10.0kb downstream 10.0kb downstream 13224 true SL2.50ch01: 94191-107414 Solanum lycopersicum
Solyc01g005120.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 94191-104190 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479619 5263 Asterids View MSA
123745247 5271 Pentapetalae View MSA
122794660 5272 Eudicot View MSA
122049542 5273 Angiosperm View MSA
121347970 5274 Embryophyte View MSA
123380694 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain