Gene : Solyc01g005490.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR11014//PTHR11014:SF103 - PEPTIDASE M20 FAMILY MEMBER // SUBFAMILY NOT NAMED Description:  Iaa-amino acid hydrolase 4 (AHRD V1 ***- B9IIQ5_POPTR); contains Interpro domain(s) IPR017439 Peptidase M20D, mername-AA028/carboxypeptidase Ss1
Genomic Order:  50 Name:  ? Solyc01g005490.2
Secondary Identifier:  ? PAC:36141004
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g005490.2 0.5kb upstream 0.5kb upstream 3179 true SL2.50ch01: 337908-341086 Solanum lycopersicum
Solyc01g005490.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 340587-341086 Solanum lycopersicum
Solyc01g005490.2 0.5kb downstream 0.5kb downstream 3179 true SL2.50ch01: 337408-340586 Solanum lycopersicum
Solyc01g005490.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 337408-337907 Solanum lycopersicum
Solyc01g005490.2 1.0kb upstream 1.0kb upstream 3679 true SL2.50ch01: 337908-341586 Solanum lycopersicum
Solyc01g005490.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 340587-341586 Solanum lycopersicum
Solyc01g005490.2 1.0kb downstream 1.0kb downstream 3679 true SL2.50ch01: 336908-340586 Solanum lycopersicum
Solyc01g005490.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 336908-337907 Solanum lycopersicum
Solyc01g005490.2 2.0kb upstream 2.0kb upstream 4679 true SL2.50ch01: 337908-342586 Solanum lycopersicum
Solyc01g005490.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 340587-342586 Solanum lycopersicum
Solyc01g005490.2 2.0kb downstream 2.0kb downstream 4679 true SL2.50ch01: 335908-340586 Solanum lycopersicum
Solyc01g005490.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 335908-337907 Solanum lycopersicum
Solyc01g005490.2 5.0kb upstream 5.0kb upstream 7679 true SL2.50ch01: 337908-345586 Solanum lycopersicum
Solyc01g005490.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 340587-345586 Solanum lycopersicum
Solyc01g005490.2 5.0kb downstream 5.0kb downstream 7679 true SL2.50ch01: 332908-340586 Solanum lycopersicum
Solyc01g005490.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 332908-337907 Solanum lycopersicum
Solyc01g005490.2 10.0kb upstream 10.0kb upstream 12679 true SL2.50ch01: 337908-350586 Solanum lycopersicum
Solyc01g005490.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 340587-350586 Solanum lycopersicum
Solyc01g005490.2 10.0kb downstream 10.0kb downstream 12679 true SL2.50ch01: 327908-340586 Solanum lycopersicum
Solyc01g005490.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 327908-337907 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469003 5263 Asterids View MSA
123748311 5271 Pentapetalae View MSA
122791889 5272 Eudicot View MSA
122046884 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain