Gene : Solyc01g005430.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K14011 - UBX domain-containing protein 6 (UBXN6, UBXD1) Description:  UBX domain protein 6 (AHRD V1 ***- Q7SXA8_DANRE); contains Interpro domain(s) IPR018997 PUB domain
Genomic Order:  44 Name:  ? Solyc01g005430.2
Secondary Identifier:  ? PAC:36138924
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g005430.2 0.5kb upstream 0.5kb upstream 4954 true SL2.50ch01: 298564-303517 Solanum lycopersicum
Solyc01g005430.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 298564-299063 Solanum lycopersicum
Solyc01g005430.2 0.5kb downstream 0.5kb downstream 4954 true SL2.50ch01: 299064-304017 Solanum lycopersicum
Solyc01g005430.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 303518-304017 Solanum lycopersicum
Solyc01g005430.2 1.0kb upstream 1.0kb upstream 5454 true SL2.50ch01: 298064-303517 Solanum lycopersicum
Solyc01g005430.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 298064-299063 Solanum lycopersicum
Solyc01g005430.2 1.0kb downstream 1.0kb downstream 5454 true SL2.50ch01: 299064-304517 Solanum lycopersicum
Solyc01g005430.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 303518-304517 Solanum lycopersicum
Solyc01g005430.2 2.0kb upstream 2.0kb upstream 6454 true SL2.50ch01: 297064-303517 Solanum lycopersicum
Solyc01g005430.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 297064-299063 Solanum lycopersicum
Solyc01g005430.2 2.0kb downstream 2.0kb downstream 6454 true SL2.50ch01: 299064-305517 Solanum lycopersicum
Solyc01g005430.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 303518-305517 Solanum lycopersicum
Solyc01g005430.2 5.0kb upstream 5.0kb upstream 9454 true SL2.50ch01: 294064-303517 Solanum lycopersicum
Solyc01g005430.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 294064-299063 Solanum lycopersicum
Solyc01g005430.2 5.0kb downstream 5.0kb downstream 9454 true SL2.50ch01: 299064-308517 Solanum lycopersicum
Solyc01g005430.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 303518-308517 Solanum lycopersicum
Solyc01g005430.2 10.0kb upstream 10.0kb upstream 14454 true SL2.50ch01: 289064-303517 Solanum lycopersicum
Solyc01g005430.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 289064-299063 Solanum lycopersicum
Solyc01g005430.2 10.0kb downstream 10.0kb downstream 14454 true SL2.50ch01: 299064-313517 Solanum lycopersicum
Solyc01g005430.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 303518-313517 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469824 5263 Asterids View MSA
123738229 5271 Pentapetalae View MSA
122787429 5272 Eudicot View MSA
122047714 5273 Angiosperm View MSA
121346643 5274 Embryophyte View MSA
123428120 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain