Gene : Solyc01g007260.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR11638//PTHR11638:SF69 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED Description:  Os04g0416500 protein (Fragment) (AHRD V1 ***- Q0JDA8_ORYSJ); contains Interpro domain(s) IPR004176 Clp, N-terminal
Genomic Order:  227 Name:  ? Solyc01g007260.2
Secondary Identifier:  ? PAC:36140347
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g007260.2 0.5kb upstream 0.5kb upstream 4123 true SL2.50ch01: 1820455-1824577 Solanum lycopersicum
Solyc01g007260.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 1824078-1824577 Solanum lycopersicum
Solyc01g007260.2 0.5kb downstream 0.5kb downstream 4123 true SL2.50ch01: 1819955-1824077 Solanum lycopersicum
Solyc01g007260.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 1819955-1820454 Solanum lycopersicum
Solyc01g007260.2 1.0kb upstream 1.0kb upstream 4623 true SL2.50ch01: 1820455-1825077 Solanum lycopersicum
Solyc01g007260.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 1824078-1825077 Solanum lycopersicum
Solyc01g007260.2 1.0kb downstream 1.0kb downstream 4623 true SL2.50ch01: 1819455-1824077 Solanum lycopersicum
Solyc01g007260.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 1819455-1820454 Solanum lycopersicum
Solyc01g007260.2 2.0kb upstream 2.0kb upstream 5623 true SL2.50ch01: 1820455-1826077 Solanum lycopersicum
Solyc01g007260.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 1824078-1826077 Solanum lycopersicum
Solyc01g007260.2 2.0kb downstream 2.0kb downstream 5623 true SL2.50ch01: 1818455-1824077 Solanum lycopersicum
Solyc01g007260.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 1818455-1820454 Solanum lycopersicum
Solyc01g007260.2 5.0kb upstream 5.0kb upstream 8623 true SL2.50ch01: 1820455-1829077 Solanum lycopersicum
Solyc01g007260.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 1824078-1829077 Solanum lycopersicum
Solyc01g007260.2 5.0kb downstream 5.0kb downstream 8623 true SL2.50ch01: 1815455-1824077 Solanum lycopersicum
Solyc01g007260.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 1815455-1820454 Solanum lycopersicum
Solyc01g007260.2 10.0kb upstream 10.0kb upstream 13623 true SL2.50ch01: 1820455-1834077 Solanum lycopersicum
Solyc01g007260.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 1824078-1834077 Solanum lycopersicum
Solyc01g007260.2 10.0kb downstream 10.0kb downstream 13623 true SL2.50ch01: 1810455-1824077 Solanum lycopersicum
Solyc01g007260.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 1810455-1820454 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478413 5263 Asterids View MSA
123743418 5271 Pentapetalae View MSA
122787302 5272 Eudicot View MSA
122049419 5273 Angiosperm View MSA
121351273 5274 Embryophyte View MSA
123382090 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain